RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TBX20Q9UMR3 447 aa20.01■□□□□ 0.79
PDLIM7-209ENST00000503346 HPSEQ9Y251 543 aa20.01■□□□□ 0.79
PDLIM7-209ENST00000503346 RALGAPA2Q2PPJ7 1873 aa20.01■□□□□ 0.79
PDLIM7-209ENST00000503346 FAM237AA0A1B0GTK4 181 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 CARNS1A5YM72 827 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 ARL5CA6NH57 179 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 GRM6O15303 877 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 TOM1L1O75674 476 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 ITGB1P05556 798 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 PFKFB1P16118 471 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 GTF2BQ00403 316 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 ZNF568Q3ZCX4 644 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 MPZL3Q6UWV2 235 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 SFR1Q86XK3 245 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 SPPL3Q8TCT6 385 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 STAMQ92783 540 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 CDT1Q9H211 546 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 NRDE2Q9H7Z3 1164 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 GDPD2Q9HCC8 539 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 TRANK1O15050 2925 aa20■□□□□ 0.79
PDLIM7-209ENST00000503346 A0A1B0GVL5 298 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 PIGRP01833 764 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 MCF2P10911 925 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 IDEP14735 1019 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 NMT1P30419 496 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 PPM1AP35813 382 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 BCAR1P56945 870 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 PLCB3Q01970 1234 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 UBE3AQ05086 875 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 RNASELQ05823 741 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 ZNF720Q7Z2F6 126 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 THNSL1Q8IYQ7 743 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 GSTCDQ8NEC7 633 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 ZFP42Q96MM3 310 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 C7orf25Q9BPX7 421 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 ALG13Q9NP73 1137 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 OLFML3Q9NRN5 406 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 SNTG2Q9NY99 539 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 PARP2Q9UGN5 583 aa19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 COL4A4P53420 1690 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-209ENST00000503346 PPP1R37O75864 691 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 FGF18O76093 207 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 RECQL4O94761 1208 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 POMCP01189 267 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 GALTP07902 379 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 SLFN14P0C7P3 912 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 GRM5P41594 1212 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 ALDH7A1P49419 539 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 SCNN1GP51170 649 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 HERC4Q5GLZ8 1057 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 ZNF280BQ86YH2 543 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 MAP4K3Q8IVH8 894 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 CCDC65Q8IXS2 484 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 SLC39A11Q8N1S5 342 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 HVCN1Q96D96 273 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 TMEM175Q9BSA9 504 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 STRA6Q9BX79 667 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 PANK4Q9NVE7 773 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 MIOSQ9NXC5 875 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 SPG21Q9NZD8 308 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 USP25Q9UHP3 1055 aa19.98■□□□□ 0.79
PDLIM7-209ENST00000503346 COL6A3P12111 3177 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 ACTN4O43707 911 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 B4GALT3O60512 393 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 DDHD2O94830 711 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 DNAJB1P25685 340 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 PBX3P40426 434 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 MCL1Q07820 350 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 DSC1Q08554 894 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 CAMK1Q14012 370 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 TIGD5Q53EQ6 642 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 CEP57L1Q8IYX8 460 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 MICALL1Q8N3F8 863 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 POF1BQ8WVV4 589 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 ZBTB45Q96K62 511 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 TCHPQ9BT92 498 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 MRPL44Q9H9J2 332 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 KLK14Q9P0G3 267 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 SERTAD1Q9UHV2 236 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 LZTS1Q9Y250 596 aa19.97■□□□□ 0.79
PDLIM7-209ENST00000503346 CLDN3O15551 220 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 SYKP43405 635 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 LIG4P49917 911 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 NDUFA8P51970 172 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 ASIC1P78348 528 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 GRIK3Q13003 919 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 COASYQ13057 564 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 NOLC1Q14978 699 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 ZC2HC1CQ53FD0 456 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 ZBTB33Q86T24 672 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 CEP120Q8N960 986 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 FSIP1Q8NA03 581 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 MRPS27Q92552 414 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 BICD1Q96G01 975 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 FAM193BQ96PV7 902 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 RPS6KC1Q96S38 1066 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 CCDC94Q9BW85 323 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 GBP3Q9H0R5 595 aa19.96■□□□□ 0.79
PDLIM7-209ENST00000503346 ANKFY1Q9P2R3 1169 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms