RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MTA3Q9BTC8 594 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 CELF4Q9BZC1 486 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 PIH1D3Q9NQM4 214 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 PDLIM7Q9NR12 457 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 CATSPERZQ9NTU4 200 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 GPR160Q9UJ42 338 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 ACSL6Q9UKU0 697 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 HDAC9Q9UKV0 1011 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 ATP8A1Q9Y2Q0 1164 aa7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 PDS5AQ29RF7 1337 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 WDR33Q9C0J8 1336 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-209ENST00000487211 RASSF10A6NK89 507 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 TRAF5O00463 557 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 PSPNO60542 156 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 HPXP02790 462 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 GNAT1P11488 350 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 RAC2P15153 192 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 RBM5P52756 815 aaKnown RBP eCLIP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 NUCB1Q02818 461 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 MECOMQ03112 1051 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 DLGAP5Q15398 846 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 NR0B2Q15466 257 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 CRY1Q16526 586 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 ZNF792Q3KQV3 632 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 TMEM177Q53S58 311 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 PRAMEF18Q5VWM3 479 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 WWC2Q6AWC2 1192 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 C16orf59Q7L2K0 433 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 DDX42Q86XP3 938 aaKnown RBP eCLIP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 Q8N1Y9 231 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 AFAP1L2Q8N4X5 818 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 CISD2Q8N5K1 135 aaKnown RBP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 ATL2Q8NHH9 583 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 NSUN4Q96CB9 384 aaKnown RBP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 TDRD3Q9H7E2 651 aaKnown RBP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 SP110Q9HB58 689 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 ECHDC1Q9NTX5 307 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 MCM8Q9UJA3 840 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 X6R8D5 127 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 SALL3Q9BXA9 1300 aa7.42□□□□□ -1.22
RTFDC1-209ENST00000487211 ZNF646O15015 1829 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 SCN4AP35499 1836 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CBX4O00257 560 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 DGKIO75912 1065 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CPEP16870 476 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 SCNN1BP51168 640 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CYP4F8P98187 520 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 LRP8Q14114 963 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 SKOR2Q2VWA4 1001 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 TIGD5Q53EQ6 642 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CST9Q5W186 159 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 SPTY2D1Q68D10 685 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 HHIPL2Q6UWX4 724 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CHD1LQ86WJ1 897 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 RPUSD2Q8IZ73 545 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 NXPE1Q8N323 547 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 ZGPATQ8N5A5 531 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 OR2W6PQ8NHA6 318 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 MYLIPQ8WY64 445 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 TEKT1Q969V4 418 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 DCPSQ96C86 337 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 EPB41L1Q9H4G0 881 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CABP5Q9NP86 173 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 GGA3Q9NZ52 723 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 RAI14Q9P0K7 980 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 ZNF70Q9UC06 446 aaPredicted RBP7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CBLCQ9ULV8 474 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
RTFDC1-209ENST00000487211 GPR75-ASB3A0A0A6YYF3 556 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 ZNF891A8MT65 544 aaPredicted RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 ADM5C9JUS6 153 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 GOLIM4O00461 696 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 MAP4K4O95819 1239 aaPredicted RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 EFEMP2O95967 443 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 CHGBP05060 677 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 COL6A2P12110 1019 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 KRT15P19012 456 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 CDK11BP21127 795 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 CDKN1CP49918 316 aaPredicted RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 GALK1P51570 392 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 CACNB3P54284 484 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 PDE1AP54750 535 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 SPIRE1Q08AE8 756 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 SART3Q15020 963 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 DHCR24Q15392 516 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 MROH9Q5TGP6 573 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 BICRALQ6AI39 1079 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 CDC42EP5Q6NZY7 148 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 OVCH1Q7RTY7 1134 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 ADGRA1Q86SQ6 560 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 NLRX1Q86UT6 975 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms