RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ADCY5O95622 1261 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 LDHAP00338 332 aaKnown RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 TPM1P09493 284 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 ZNF18P17022 549 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 ARL2P36404 184 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 NAMPTP43490 491 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 POU5F1Q01860 360 aaKnown RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 SP4Q02446 784 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 STRN3Q13033 797 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 ADAM9Q13443 819 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 NCAPHQ15003 741 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 PLCB4Q15147 1175 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 MTERF2Q49AM1 385 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 UTP14CQ5TAP6 766 aaKnown RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 C11orf57Q6ZUT1 292 aaPredicted RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 EPM2AIP1Q7L775 607 aaPredicted RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 HAUS6Q7Z4H7 955 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 APBB1IPQ7Z5R6 666 aaPredicted RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 FRMD5Q7Z6J6 570 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 C12orf56Q8IXR9 622 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 AFG1LQ8WV93 481 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 PSPC1Q8WXF1 523 aaKnown RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 TRIM44Q96DX7 344 aaPredicted RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 PCYT2Q99447 389 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 MKNK1Q9BUB5 465 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 NUP58Q9BVL2 599 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 RUSC1Q9BVN2 902 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 SRRTQ9BXP5 876 aaKnown RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 NFKBIZQ9BYH8 718 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 GBP3Q9H0R5 595 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 KMT5AQ9NQR1 393 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 WRAP73Q9P2S5 460 aaPredicted RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 LIMA1Q9UHB6 759 aaKnown RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 NOD1Q9Y239 953 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 FRMD4BQ9Y2L6 1034 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.69□□□□□ -1.188e-9■■■■■ 31.5
SHQ1-207ENST00000475558 TRIP12Q14669 1992 aaPredicted RBP7.69□□□□□ -1.18
SHQ1-207ENST00000475558 SCN10AQ9Y5Y9 1956 aa7.69□□□□□ -1.18
SHQ1-207ENST00000475558 CCDC169A6NNP5 214 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 PRR33A8MZF0 331 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 K7ERI5 159 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 ZBTB39O15060 712 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 SLC16A3O15427 465 aaKnown RBP7.68□□□□□ -1.18
SHQ1-207ENST00000475558 STX10O60499 249 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 LPXNO60711 386 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 USO1O60763 962 aaKnown RBP7.68□□□□□ -1.18
SHQ1-207ENST00000475558 ARHGEF15O94989 841 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 LGALS2P05162 132 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 MMP3P08254 477 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 INSRRP14616 1297 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 ATP4AP20648 1035 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 CASP1P29466 404 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 PSMC2P35998 433 aaKnown RBP7.68□□□□□ -1.18
SHQ1-207ENST00000475558 NCKAP1LP55160 1127 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 NPEPPSP55786 919 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 MARSP56192 900 aaKnown RBP7.68□□□□□ -1.18
SHQ1-207ENST00000475558 PEX3P56589 373 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 GSDMDP57764 484 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 FANCCQ00597 558 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 CETN1Q12798 172 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 EMC2Q15006 297 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 KYAT1Q16773 422 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 TCP11X2Q5H9J9 407 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 FKBP15Q5T1M5 1219 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 CDKAL1Q5VV42 579 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 ANKRD40Q6AI12 368 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 TTI2Q6NXR4 508 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 RSPH3Q86UC2 560 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 SFR1Q86XK3 245 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 ZBTB8OSQ8IWT0 167 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 DRC7Q8IY82 874 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 KIAA0895Q8NCT3 520 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 DEPTORQ8TB45 409 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 CAGE1Q8TC20 777 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 LRRC15Q8TF66 581 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 SCFD1Q8WVM8 642 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 ZFRQ96KR1 1074 aaKnown RBP7.68□□□□□ -1.18
SHQ1-207ENST00000475558 MAP7D2Q96T17 732 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 C16orf70Q9BSU1 422 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 STRA6Q9BX79 667 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 C11orf16Q9NQ32 467 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 GDAQ9Y2T3 454 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 DAAM1Q9Y4D1 1078 aa7.68□□□□□ -1.18
SHQ1-207ENST00000475558 A0A087WWV3 80 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 SMIM35A0A1B0GVV1 85 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ABHD14A-ACY1A0A1B0GW23 586 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 A0A1W2PQC6 194 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 FAM86C2PA6NEL3 165 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 SFI1A8K8P3 1242 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 N4BP3O15049 544 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 EFCAB14O75071 495 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 EPB41P11171 864 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 ALADP13716 330 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 GARTP22102 1010 aa7.67□□□□□ -1.18
SHQ1-207ENST00000475558 DEKP35659 375 aaKnown RBP7.67□□□□□ -1.18
SHQ1-207ENST00000475558 NPTX2P47972 431 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms