RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 LIG4P49917 911 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 MCCD1P59942 119 aaPredicted RBP13.82□□□□□ -0.2
SND1-209ENST00000470723 NFIL3Q16649 462 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 KYAT1Q16773 422 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 CT47A1Q5JQC4 288 aaPredicted RBP13.82□□□□□ -0.2
SND1-209ENST00000470723 ALKAL1Q6UXT8 129 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 NPAS4Q8IUM7 802 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 SLC9A9Q8IVB4 645 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 TDHQ8IZJ6 230 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 ZNF689Q96CS4 500 aaPredicted RBP13.82□□□□□ -0.2
SND1-209ENST00000470723 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
SND1-209ENST00000470723 SLC9A7Q96T83 725 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 ADPGKQ9BRR6 497 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 CDT1Q9H211 546 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 UBN1Q9NPG3 1134 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 DMAC2Q9NW81 257 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 TRAF3IP3Q9Y228 551 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 GDAQ9Y2T3 454 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 IPPQ9Y573 584 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
SND1-209ENST00000470723 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
SND1-209ENST00000470723 DGKIO75912 1065 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 GJB5O95377 273 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 GRM5P41594 1212 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 KCNJ6P48051 423 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 DEFB103AP81534 67 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
SND1-209ENST00000470723 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 XKR4Q5GH76 650 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 CDR2LQ86X02 465 aaPredicted RBP13.81□□□□□ -0.2
SND1-209ENST00000470723 SYCP3Q8IZU3 236 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 MLKLQ8NB16 471 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 FBXL18Q96ME1 805 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 TCHPQ9BT92 498 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 RC3H2Q9HBD1 1191 aaKnown RBP13.81□□□□□ -0.2
SND1-209ENST00000470723 RNF19AQ9NV58 838 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 TYW1Q9NV66 732 aaKnown RBP13.81□□□□□ -0.2
SND1-209ENST00000470723 GIT1Q9Y2X7 761 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 ZMYM2Q9UBW7 1377 aa13.81□□□□□ -0.2
SND1-209ENST00000470723 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
SND1-209ENST00000470723 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
SND1-209ENST00000470723 OGTO15294 1046 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 LETM1O95202 739 aaPredicted RBP13.8□□□□□ -0.2
SND1-209ENST00000470723 NPTXRO95502 500 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
SND1-209ENST00000470723 HERC6Q8IVU3 1022 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
SND1-209ENST00000470723 BICD1Q96G01 975 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 RNPC3Q96LT9 517 aaKnown RBP13.8□□□□□ -0.2
SND1-209ENST00000470723 IKZF4Q9H2S9 585 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 SEMA6BQ9H3T3 888 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 AGPAT3Q9NRZ7 376 aa13.8□□□□□ -0.2
SND1-209ENST00000470723 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 TISP43B9A030 160 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 HOXA2O43364 376 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 OFD1O75665 1012 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 CLTAP09496 248 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 ITGA4P13612 1032 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 NLRP12P59046 1061 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
SND1-209ENST00000470723 LRIT3Q3SXY7 679 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 ZNF568Q3ZCX4 644 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 ISM2Q6H9L7 571 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 CRELD2Q6UXH1 353 aaPredicted RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 HS2ST1Q7LGA3 356 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 ZC3H3Q8IXZ2 948 aaKnown RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 SMYD4Q8IYR2 804 aaPredicted RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 HACE1Q8IYU2 909 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 GSTCDQ8NEC7 633 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 TSPAN18Q96SJ8 248 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 RAD9AQ99638 391 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 TRIM6Q9C030 488 aaPredicted RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 KIAA1586Q9HCI6 787 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 CPSF3Q9UKF6 684 aaKnown RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
SND1-209ENST00000470723 INSL6Q9Y581 213 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 PTPRSQ13332 1948 aa13.79□□□□□ -0.2
SND1-209ENST00000470723 ZBBXA8MT70 800 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 BIN1O00499 593 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 EXTL3O43909 919 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 CCNE1P24864 410 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 STIM1Q13586 685 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 TMEM132AQ24JP5 1023 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 EDRF1Q3B7T1 1238 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 CLLU1OSQ5K130 101 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 ZBTB33Q86T24 672 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 ACAP3Q96P50 834 aa13.78□□□□□ -0.2
SND1-209ENST00000470723 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms