RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 SLFN14P0C7P3 912 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 ITGA4P13612 1032 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 BMPR1AP36894 532 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 AMPD3Q01432 767 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 E2F4Q16254 413 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 UBXN11Q5T124 520 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 LRRC43Q8N309 656 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 CASD1Q96PB1 797 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 UBN1Q9NPG3 1134 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 TYW1Q9NV66 732 aaKnown RBP21.27■■□□□ 1
PCGF3-208ENST00000470161 INPP5FQ9Y2H2 1132 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 IPPQ9Y573 584 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 PCDHB12Q9Y5F1 795 aa21.27■■□□□ 1
PCGF3-208ENST00000470161 RB1P06400 928 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 AFMP43652 599 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 IQCB1Q15051 598 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 CLLU1OSQ5K130 101 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 ATF7IP2Q5U623 682 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 MRPL10Q7Z7H8 261 aaKnown RBP21.26■□□□□ 0.99
PCGF3-208ENST00000470161 FAM178BQ8IXR5 827 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 PAGE5Q96GU1 130 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 PDLIM2Q96JY6 352 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 C11orf84Q9BUA3 381 aaPredicted RBP21.26■□□□□ 0.99
PCGF3-208ENST00000470161 APOL6Q9BWW8 343 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 MRPL4Q9BYD3 311 aaKnown RBP21.26■□□□□ 0.99
PCGF3-208ENST00000470161 RSAD1Q9HA92 442 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 COL4A6Q14031 1691 aa21.26■□□□□ 0.99
PCGF3-208ENST00000470161 EPOPA6NHQ4 379 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 SCP2P22307 547 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 PLCB2Q00722 1185 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 RNASELQ05823 741 aaKnown RBP21.25■□□□□ 0.99
PCGF3-208ENST00000470161 GPM6BQ13491 265 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 TMEM161BQ8NDZ6 487 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 URGCPQ8TCY9 931 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 GDPD5Q8WTR4 605 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 TCHPQ9BT92 498 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 PLVAPQ9BX97 442 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 USP20Q9Y2K6 914 aa21.25■□□□□ 0.99
PCGF3-208ENST00000470161 MYMKA6NI61 221 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 AP5Z1O43299 807 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 IDEP14735 1019 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 ABCD1P33897 745 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 ZNF131P52739 623 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 NOMO2Q5JPE7 1267 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 AGMOQ6ZNB7 445 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 SMG8Q8ND04 991 aaKnown RBP21.24■□□□□ 0.99
PCGF3-208ENST00000470161 SMARCE1Q969G3 411 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 CCDC34Q96HJ3 373 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 NAT10Q9H0A0 1025 aaKnown RBP21.24■□□□□ 0.99
PCGF3-208ENST00000470161 PDZD7Q9H5P4 517 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 RNF19AQ9NV58 838 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 MAN1B1Q9UKM7 699 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 HES2Q9Y543 173 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 TTLL13PA6NNM8 815 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 MEIS3P2A8K0S8 358 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 H3BNC9 293 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 K7ENM7 598 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 HAUS6Q7Z4H7 955 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 DHX40Q8IX18 779 aaKnown RBP21.24■□□□□ 0.99
PCGF3-208ENST00000470161 AOPEPQ8N6M6 819 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 SLC17A8Q8NDX2 589 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 STAMQ92783 540 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 BICD1Q96G01 975 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 NXF3Q9H4D5 531 aaKnown RBP21.24■□□□□ 0.99
PCGF3-208ENST00000470161 KANSL3Q9P2N6 904 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 PARP2Q9UGN5 583 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 TRANK1O15050 2925 aa21.24■□□□□ 0.99
PCGF3-208ENST00000470161 OFD1O75665 1012 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 SLC34A2O95436 690 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 ADCY5O95622 1261 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 MAPTP10636 758 aaKnown RBP21.23■□□□□ 0.99
PCGF3-208ENST00000470161 LAG3P18627 525 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 CASP1P29466 404 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 NCKAP1LP55160 1127 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 ADGRE1Q14246 886 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 DCAF4L1Q3SXM0 396 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 NT5DC1Q5TFE4 455 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 MICALL1Q8N3F8 863 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 FAM193BQ96PV7 902 aaPredicted RBP21.23■□□□□ 0.99
PCGF3-208ENST00000470161 TARS2Q9BW92 718 aaKnown RBP21.23■□□□□ 0.99
PCGF3-208ENST00000470161 MAGEF1Q9HAY2 307 aa21.23■□□□□ 0.99
PCGF3-208ENST00000470161 C5orf67F2Z3F1 127 aa21.22■□□□□ 0.99
PCGF3-208ENST00000470161 GAP43P17677 238 aa21.22■□□□□ 0.99
PCGF3-208ENST00000470161 PTPROQ16827 1216 aa21.22■□□□□ 0.99
PCGF3-208ENST00000470161 ACO2Q99798 780 aaKnown RBP21.22■□□□□ 0.99
PCGF3-208ENST00000470161 RNF39Q9H2S5 420 aa21.22■□□□□ 0.99
PCGF3-208ENST00000470161 TNFSF13BQ9Y275 285 aa21.22■□□□□ 0.99
PCGF3-208ENST00000470161 GIT1Q9Y2X7 761 aa21.22■□□□□ 0.99
PCGF3-208ENST00000470161 BECN2A8MW95 431 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 GOLGA6L19H0YKK7 550 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 EDN1P05305 212 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 AKAP5P24588 427 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 MATR3P43243 847 aaKnown RBP eCLIP21.21■□□□□ 0.995e-7■■■■■ 42.2
PCGF3-208ENST00000470161 ALDH7A1P49419 539 aaKnown RBP21.21■□□□□ 0.99
PCGF3-208ENST00000470161 HERC4Q5GLZ8 1057 aaPredicted RBP21.21■□□□□ 0.99
PCGF3-208ENST00000470161 TAS1R3Q7RTX0 852 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 CCDC65Q8IXS2 484 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 THNSL1Q8IYQ7 743 aa21.21■□□□□ 0.99
PCGF3-208ENST00000470161 MAFAQ8NHW3 353 aaPredicted RBP21.21■□□□□ 0.99
PCGF3-208ENST00000470161 P2RX5Q93086 422 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms