RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 CCDC142Q17RM4 750 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 IZUMO3Q5VZ72 239 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 TWF2Q6IBS0 349 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 USP17L2Q6R6M4 530 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 TMEM179Q6ZVK1 233 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 OSBPL3Q9H4L5 887 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 SMG5Q9UPR3 1016 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 PRG3Q9Y2Y8 225 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 LRRC53A6NM62 1247 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RASSF9O75901 435 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 SFNP31947 248 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 MTMR1Q13613 665 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 TRIM71Q2Q1W2 868 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 TMED8Q6PL24 325 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 CLEC4FQ8N1N0 589 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RAD54LQ92698 747 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RGL1Q9NZL6 768 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 NFKBIL1Q9UBC1 381 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 MLH3Q9UHC1 1453 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 NBNO60934 754 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 NLRP11P59045 1033 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 RAB14P61106 215 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 GJC2Q5T442 439 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF579Q8NAF0 562 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF560Q96MR9 790 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 PPP1R2P1Q96PQ5 205 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 OSBPL9Q96SU4 736 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 MRPL1Q9BYD6 325 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 INTS2Q9H0H0 1204 aaKnown RBP9.5□□□□□ -0.89
BRCA1-205ENST00000461221 PIDD1Q9HB75 910 aa9.5□□□□□ -0.89
BRCA1-205ENST00000461221 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CUL4AQ13619 759 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 TP53BP2Q13625 1128 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 RASGRF1Q13972 1273 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 UGP2Q16851 508 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 BTBD8Q5XKL5 378 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 SPATA21Q7Z572 469 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 NLRP10Q86W26 655 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 AGGF1Q8N302 714 aaeCLIP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 LCORLQ8N3X6 602 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PCYOX1LQ8NBM8 494 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ARL8AQ96BM9 186 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 UNC45AQ9H3U1 944 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 C10orf88Q9H8K7 445 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PPCSQ9HAB8 311 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ARL2BPQ9Y2Y0 163 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 HSD17B4P51659 736 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 VAMP7P51809 220 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ACTR2P61160 394 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 SFR1Q86XK3 245 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 TEX2Q8IWB9 1127 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 BPIFA3Q9BQP9 254 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PARVAQ9NVD7 372 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ZFATQ9P243 1243 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 STXBP3O00186 592 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 AKAP10O43572 662 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 SERPINB1P30740 379 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 SLC1A1P43005 524 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 SERPINB9P50453 376 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 AASDHQ4L235 1098 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CCDC137Q6PK04 289 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 TRAF7Q6Q0C0 670 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 SPON2Q9BUD6 331 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 DHX35Q9H5Z1 703 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 BATF3Q9NR55 127 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 KLC4Q9NSK0 619 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PCSK1NQ9UHG2 260 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PCDHA6Q9UN73 950 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PCDHA8Q9Y5H6 950 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 MAP3K13O43283 966 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CYBBP04839 570 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 EIF2S1P05198 315 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 HOXA13P31271 388 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 GCLMP48507 274 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CDK17Q00537 523 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ACTN3Q08043 901 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CCDC15Q0P6D6 951 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PDAP1Q13442 181 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 GAS2L3Q86XJ1 694 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 YAF2Q8IY57 180 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 FAM213AQ9BRX8 229 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 NSMCE4AQ9NXX6 385 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 FEM1BQ9UK73 627 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CDC25AP30304 524 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 CRKLP46109 303 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ARL4DP49703 201 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 PRKCQQ04759 706 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 NME3Q13232 169 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 DAB2IPQ5VWQ8 1189 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ANKRD40Q6AI12 368 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 DGKHQ86XP1 1220 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms