RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 PROM2Q8N271 834 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 CEP70Q8NHQ1 597 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 ARL8AQ96BM9 186 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 CHRNA5P30532 468 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 MAGOHP61326 146 aaKnown RBP16.31■□□□□ 0.2
PTPRF-206ENST00000429895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPRF-206ENST00000429895 SRPK1Q96SB4 655 aaKnown RBP16.31■□□□□ 0.2
PTPRF-206ENST00000429895 STX18Q9P2W9 335 aaKnown RBP16.31■□□□□ 0.2
PTPRF-206ENST00000429895 CYBBP04839 570 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 KRT7P08729 469 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
PTPRF-206ENST00000429895 A0A087WUV0 522 aaPredicted RBP16.3■□□□□ 0.2
PTPRF-206ENST00000429895 LRRC14Q15048 493 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 TADA2AO75478 443 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 LMNAP02545 664 aaKnown RBP16.3■□□□□ 0.2
PTPRF-206ENST00000429895 CDK17Q00537 523 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 SPDYE7PQ495Y7 208 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 KCNV2Q8TDN2 545 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ESYT3A0FGR9 886 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 CCDC151A5D8V7 595 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ASB14A6NK59 587 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ANKS3Q6ZW76 656 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ZNF560Q96MR9 790 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 MXD3Q9BW11 206 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 HPS4Q9NQG7 708 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 BFARQ9NZS9 450 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ARL4DP49703 201 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 LRRC8EQ6NSJ5 796 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ANKMY2Q8IV38 441 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 NUDCD3Q8IVD9 361 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 RAB42Q8N4Z0 105 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 CENPKQ9BS16 269 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
PTPRF-206ENST00000429895 DDX56Q9NY93 547 aaKnown RBP16.3■□□□□ 0.2
PTPRF-206ENST00000429895 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ATP7BP35670 1465 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 PRKCBP05771 671 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 CDC27P30260 824 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 RGS7P49802 495 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 TPI1P60174 286 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 PGBD4Q96DM1 585 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 AGAP3Q96P47 875 aa16.3■□□□□ 0.2
PTPRF-206ENST00000429895 ZBTB17Q13105 803 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 NUDT18Q6ZVK8 323 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 DDX47Q9H0S4 455 aaKnown RBP16.29■□□□□ 0.2
PTPRF-206ENST00000429895 DOLKQ9UPQ8 538 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 RARBP10826 455 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 TYK2P29597 1187 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 YWHABP31946 246 aaKnown RBP16.29■□□□□ 0.2
PTPRF-206ENST00000429895 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 MTBPQ96DY7 904 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 RUBCNLQ9H714 662 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.29■□□□□ 0.2
PTPRF-206ENST00000429895 GTF2H3Q13889 308 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 EMBQ6PCB8 327 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 B4GALNT2Q8NHY0 566 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 AKR1B1P15121 316 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 DUOXA2Q1HG44 320 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 ZC3H15Q8WU90 426 aaKnown RBP16.29■□□□□ 0.2
PTPRF-206ENST00000429895 BARHL2Q9NY43 387 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 ANKRD65E5RJM6 399 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 HAUS5O94927 633 aa16.29■□□□□ 0.2
PTPRF-206ENST00000429895 ARHGAP10A1A4S6 786 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 KBTBD13C9JR72 458 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 ZNF197O14709 1029 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 CYP27B1O15528 508 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 ST8SIA6P61647 398 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 LRRC37BQ96QE4 947 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 MYCBPQ99417 103 aaPredicted RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 CYP26A1O43174 497 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 CAV1Q03135 178 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 SEPT5Q99719 369 aaPredicted RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 JPH1Q9HDC5 661 aaPredicted RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 PARVAQ9NVD7 372 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 ASAP2O43150 1006 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 MYBP10242 640 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 MYBL1P10243 752 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 SESN2P58004 480 aaPredicted RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 PATL1Q86TB9 770 aaKnown RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 RHOT1Q8IXI2 618 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 PPHLN1Q8NEY8 458 aaKnown RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 SNF8Q96H20 258 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 TGS1Q96RS0 853 aaKnown RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 ADAM33Q9BZ11 813 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 MAP4P27816 1152 aaKnown RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 NMT1P30419 496 aaKnown RBP16.28■□□□□ 0.2
PTPRF-206ENST00000429895 AKT1P31749 480 aa16.28■□□□□ 0.2
PTPRF-206ENST00000429895 GGCXP38435 758 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms