RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 IGF2RP11717 2491 aa13.03□□□□□ -0.32
ALMS1P1-201ENST00000428767 COL4A2P08572 1712 aa13.02□□□□□ -0.32
ALMS1P1-201ENST00000428767 LRP3O75074 770 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 MLH1P40692 756 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 LIFRP42702 1097 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 SRSF5Q13243 272 aaKnown RBP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 SIM2Q14190 667 aaPredicted RBP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 UBXN11Q5T124 520 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 RABGGTAQ92696 567 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 GAD1Q99259 594 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 NELL2Q99435 816 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 APOL6Q9BWW8 343 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 CHST7Q9NS84 486 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 HCFC1R1Q9NWW0 138 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 BARHL2Q9NY43 387 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 ARID2Q68CP9 1835 aa13.02□□□□□ -0.33
ALMS1P1-201ENST00000428767 ARL5CA6NH57 179 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 GAS7O60861 476 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 ITGA4P13612 1032 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 NCLP19338 710 aaKnown RBP13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 NRLP54845 237 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 DSC1Q08554 894 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 ADCY1Q08828 1119 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 FZD5Q13467 585 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 CSRP2Q16527 193 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 LIN9Q5TKA1 542 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 MBOAT7Q96N66 472 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 COLEC11Q9BWP8 271 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 PLA2G2FQ9BZM2 168 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 RNF39Q9H2S5 420 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 IFT122Q9HBG6 1241 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 MIOSQ9NXC5 875 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 MRPS17Q9Y2R5 130 aaKnown RBP13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 HES2Q9Y543 173 aa13.01□□□□□ -0.33
ALMS1P1-201ENST00000428767 IGKV6-21A0A0C4DH24 114 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 SHISA7A6NL88 538 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 hCG_1984214I3L0E3 225 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 PROS1P07225 676 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 C8AP07357 584 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 CHMLP26374 656 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 SATB1Q01826 763 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 RTN1Q16799 776 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 AASDHQ4L235 1098 aaPredicted RBP13□□□□□ -0.33
ALMS1P1-201ENST00000428767 PLA2G4FQ68DD2 849 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 TEX2Q8IWB9 1127 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 NPAS3Q8IXF0 933 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 ZNF713Q8N859 430 aaPredicted RBP13□□□□□ -0.33
ALMS1P1-201ENST00000428767 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
ALMS1P1-201ENST00000428767 LENG9Q96B70 501 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 EIF2AQ9BY44 585 aaKnown RBP13□□□□□ -0.33
ALMS1P1-201ENST00000428767 CHRDQ9H2X0 955 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 IPPQ9Y573 584 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
ALMS1P1-201ENST00000428767 NBEAQ8NFP9 2946 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 C1QTNF9BB2RNN3 333 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 CHURC1-FNTBB4DL54 471 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 MSH4O15457 936 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 XYLBO75191 536 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 NR1I2O75469 434 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 C1RP00736 705 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 C1QTNF9P0C862 333 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 SRGAP2CP0DJJ0 459 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 HOXA11P31270 313 aaPredicted RBP12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 FNTBP49356 437 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 JAK3P52333 1124 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 SHC2P98077 582 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 CREMQ03060 361 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 FUT2Q10981 343 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 GRM2Q14416 872 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 PPP2R5DQ14738 602 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 CCDC6Q16204 474 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 RTP2Q5QGT7 225 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 APOA5Q6Q788 366 aa12.99□□□□□ -0.33
ALMS1P1-201ENST00000428767 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms