RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 H0YGN5 161 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 RBAK-RBAKDNI3L0D1 243 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 STXBP3O00186 592 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 MEIS2O14770 477 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 CTAGE5O15320 804 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 EPB41L2O43491 1005 aaKnown RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 ADAM11O75078 769 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 DUSP11O75319 330 aaKnown RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 LARGE1O95461 756 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 ASGR1P07306 291 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 COL6A1P12109 1028 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 RAG1P15918 1043 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 EDNRBP24530 442 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 SMARCA1P28370 1054 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 CD68P34810 354 aaPredicted RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 NEK4P51957 841 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 RTP1P59025 263 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 AMPD3Q01432 767 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 SLC7A5Q01650 507 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 SRSF11Q05519 484 aaKnown RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 PGM5Q15124 567 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 NTRK3Q16288 839 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 KCNA10Q16322 511 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 C21orf62-AS1Q17RA5 79 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 LY6KQ17RY6 165 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 SLC10A6Q3KNW5 377 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 RNF180Q86T96 592 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 MAP4K3Q8IVH8 894 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 NPAS3Q8IXF0 933 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 NECAB1Q8N987 351 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 GALNT6Q8NCL4 622 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 ARRDC4Q8NCT1 418 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 ZSWIM2Q8NEG5 633 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 DNERQ8NFT8 737 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 OR6J1Q8NGC5 347 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 MORC4Q8TE76 937 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 NSUN6Q8TEA1 469 aaKnown RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 CUL5Q93034 780 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 ACSF2Q96CM8 615 aaPredicted RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 UIMC1Q96RL1 719 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 MPHOSPH6Q99547 160 aaKnown RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 PDCD2LQ9BRP1 358 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 HTATIP2Q9BUP3 242 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 AGXT2Q9BYV1 514 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 TM6SF1Q9BZW5 370 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 KCNK4Q9NYG8 393 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 RTEL1Q9NZ71 1219 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 TPCN1Q9ULQ1 816 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 SMCO2A6NFE2 343 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 CPLX1O14810 134 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 FANCGO15287 622 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 SUSD5O60279 629 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PQBP1O60828 265 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 DEAF1O75398 565 aaPredicted RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 MYL3P08590 195 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 TXNP10599 105 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 SCG2P13521 617 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 CCND2P30279 289 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 POLR2BP30876 1174 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 ADCY7P51828 1080 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 ACLYP53396 1101 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 GJA9P57773 515 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PSMC6P62333 389 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 MRPS9P82933 396 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 AKAP17AQ02040 695 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 ID3Q02535 119 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 GHRHRQ02643 423 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 SCRN1Q12765 414 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 TRAF1Q13077 416 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PPP2R5BQ15173 497 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 STXBP2Q15833 593 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PKN1Q16512 942 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 FSCN1Q16658 493 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 TRIM60Q495X7 471 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 DUSP28Q4G0W2 176 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 ZBTB37Q5TC79 503 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 JAKMIP3Q5VZ66 844 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 IQSEC1Q6DN90 963 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 CXCL17Q6UXB2 119 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 SLC39A5Q6ZMH5 540 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 MCATQ8IVS2 390 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 SYNPOQ8N3V7 929 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 FAM13CQ8NE31 585 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 KLHDC9Q8NEP7 349 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 SCFD2Q8WU76 684 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 KLHL6Q8WZ60 621 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 DHRS1Q96LJ7 313 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 AIFM3Q96NN9 605 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 C22orf23Q9BZE7 217 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 AP5M1Q9H0R1 490 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 UPF3AQ9H1J1 476 aaKnown RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 BCAS3Q9H6U6 928 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PSTPIP2Q9H939 334 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PRDM6Q9NQX0 595 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 PRDM5Q9NQX1 630 aaPredicted RBP5.56□□□□□ -1.52
VPS41-205ENST00000414632 STARD7Q9NQZ5 370 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 GJB4Q9NTQ9 266 aa5.56□□□□□ -1.52
VPS41-205ENST00000414632 VPS54Q9P1Q0 977 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms