RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 PCDHA5Q9Y5H7 936 aa6.75□□□□□ -1.33
AP3S1-202ENST00000395548 BACE2Q9Y5Z0 518 aa6.75□□□□□ -1.33
AP3S1-202ENST00000395548 hCG_2014768A0A024R1R8 64 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 TRBV23OR9-2A0A075B6M9 112 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 C2orf71A6NGG8 1288 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 STXBP3O00186 592 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 HTATSF1O43719 755 aaKnown RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 BUB1BO60566 1050 aaPredicted RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 VAMP4O75379 141 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 CSF2RAP15509 400 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 RABGGTBP53611 331 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 EIF4A1P60842 406 aaKnown RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 AIMP1Q12904 312 aaKnown RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 TARBP2Q15633 366 aaKnown RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 PTPROQ16827 1216 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 PROSER3Q2NL68 480 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 DPY19L1Q2PZI1 675 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 MCM10Q7L590 875 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 LRP10Q7Z4F1 713 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 ZNF804AQ7Z570 1209 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 IGDCC3Q8IVU1 814 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 CRACR2BQ8N4Y2 399 aaPredicted RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 GPRC5AQ8NFJ5 357 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 CERS4Q9HA82 394 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 PARD6AQ9NPB6 346 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 DBR1Q9UK59 544 aaKnown RBP6.74□□□□□ -1.33
AP3S1-202ENST00000395548 FRYLO94915 3013 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 MROH7Q68CQ1 1323 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 TECTAO75443 2155 aa6.74□□□□□ -1.33
AP3S1-202ENST00000395548 GCN1Q92616 2671 aaKnown RBP6.73□□□□□ -1.33
AP3S1-202ENST00000395548 DMDP11532 3685 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 LOC102724159A0A0B4J2E5 919 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 PDE8AO60658 829 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 CLSTN1O94985 981 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 CA3P07451 260 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 MYOGP15173 224 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 ATP2A2P16615 1042 aaKnown RBP6.73□□□□□ -1.33
AP3S1-202ENST00000395548 ZNF143P52747 638 aaPredicted RBP6.73□□□□□ -1.33
AP3S1-202ENST00000395548 VCPP55072 806 aaKnown RBP6.73□□□□□ -1.33
AP3S1-202ENST00000395548 NCAPHQ15003 741 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 PWP2Q15269 919 aaKnown RBP6.73□□□□□ -1.33
AP3S1-202ENST00000395548 LRRC41Q15345 812 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 PLEKHH3Q7Z736 793 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 CABP7Q86V35 215 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 TMEFF1Q8IYR6 380 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 KIAA2013Q8IYS2 634 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 SCYL3Q8IZE3 742 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 ANAPC16Q96DE5 110 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 SIN3AQ96ST3 1273 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 MCMBPQ9BTE3 642 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 ISCA1Q9BUE6 129 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 SEMA4AQ9H3S1 761 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 MYH16Q9H6N6 1097 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 EPB41L4AQ9HCS5 686 aaPredicted RBP6.73□□□□□ -1.33
AP3S1-202ENST00000395548 TBX21Q9UL17 535 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 AKT3Q9Y243 479 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 AK9Q5TCS8 1911 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 FRMPD3Q5JV73 1810 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 ASPMQ8IZT6 3477 aa6.73□□□□□ -1.33
AP3S1-202ENST00000395548 TRIM75PA6NK02 468 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 KIF28PB7ZC32 967 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 U2SURPO15042 1029 aaKnown RBP6.72□□□□□ -1.33
AP3S1-202ENST00000395548 SEPT4O43236 478 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 IL1R1P14778 569 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
AP3S1-202ENST00000395548 PAMP19021 973 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 TACR1P25103 407 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 CTSWP56202 376 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 ZXDAP98168 799 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 CCDC181Q5TID7 509 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 RNF180Q86T96 592 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 FAM169BQ8N8A8 192 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 NEK9Q8TD19 979 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 NUP133Q8WUM0 1156 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 ZSWIM4Q9H7M6 989 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 MIS18AQ9NYP9 233 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 BRWD1Q9NSI6 2320 aa6.72□□□□□ -1.33
AP3S1-202ENST00000395548 BPTFQ12830 3046 aa6.71□□□□□ -1.33
AP3S1-202ENST00000395548 NAV2Q8IVL1 2488 aa6.71□□□□□ -1.33
AP3S1-202ENST00000395548 NPHP3-ACAD11A0A0J9YXS1 232 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 A0A1B0GUL7 405 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 EPOPA6NHQ4 379 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 NOP56O00567 594 aaKnown RBP6.71□□□□□ -1.34
AP3S1-202ENST00000395548 CYBAP13498 195 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 EIF2S2P20042 333 aaKnown RBP6.71□□□□□ -1.34
AP3S1-202ENST00000395548 HOXA5P20719 270 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 DNAJA1P31689 397 aaKnown RBP6.71□□□□□ -1.34
AP3S1-202ENST00000395548 NCKAP1LP55160 1127 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 ANAPC15P60006 121 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 IRX3P78415 501 aaPredicted RBP6.71□□□□□ -1.34
AP3S1-202ENST00000395548 ZNF200P98182 395 aaPredicted RBP6.71□□□□□ -1.34
AP3S1-202ENST00000395548 SIGLEC14Q08ET2 396 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 MFSD14BQ5SR56 506 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 TREML2Q5T2D2 321 aa6.71□□□□□ -1.34
AP3S1-202ENST00000395548 OTOP2Q7RTS6 562 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms