RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 HIPK4Q8NE63 616 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SLC35C1Q96A29 364 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 SERPINB12Q96P63 405 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 FGFBP2Q9BYJ0 223 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 GANQ9H2C0 597 aa14.35□□□□□ -0.11
SEC23A-201ENST00000307712 MRPL47Q9HD33 250 aaKnown RBP14.35□□□□□ -0.11
SEC23A-201ENST00000307712 CHD2O14647 1828 aaKnown RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 RIPK2O43353 540 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 NOL4O94818 638 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 LMNAP02545 664 aaKnown RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 CD58P19256 250 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 PDIA2Q13087 525 aaKnown RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 TMEM119Q4V9L6 283 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 BTNL9Q6UXG8 535 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 MORC4Q8TE76 937 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 DNAJC9Q8WXX5 260 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 FMN2Q9NZ56 1722 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 STAMBPO95630 424 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 SMARCA1P28370 1054 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 PRELPP51888 382 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 NR1H3Q13133 447 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 ATP8B4Q8TF62 1192 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 KRT35Q92764 455 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 ARFIP2P53365 341 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 IRX4P78413 519 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 KCNA1Q09470 495 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 IRF2BP2Q7Z5L9 587 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 ANKMY2Q8IV38 441 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 NAF1Q96HR8 494 aaKnown RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 FAM161BQ96MY7 647 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 KLF6Q99612 283 aaPredicted RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 NARFQ9UHQ1 456 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 MAD1L1Q9Y6D9 718 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 ATXN2Q99700 1313 aaKnown RBP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 SNX3O60493 162 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 SMC1BQ8NDV3 1235 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 RAB3IL1Q8TBN0 382 aa14.34□□□□□ -0.11
SEC23A-201ENST00000307712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
SEC23A-201ENST00000307712 RASSF9O75901 435 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 MAP7Q14244 749 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 RASA3Q14644 834 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 P3H1Q32P28 736 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 LXNQ9BS40 222 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 NRXN3Q9Y4C0 1643 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 GH2P01242 217 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 GPSM2P81274 684 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 XRCC4Q13426 336 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 EPHA7Q15375 998 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 NLRX1Q86UT6 975 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 PDIK1LQ8N165 341 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.12
SEC23A-201ENST00000307712 TUBB6Q9BUF5 446 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
SEC23A-201ENST00000307712 ANKFY1Q9P2R3 1169 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 DAGLAQ9Y4D2 1042 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 MYH10P35580 1976 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 RGPD1P0DJD0 1748 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 NDC80O14777 642 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 PPP4CP60510 307 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 COG2Q14746 738 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 C2CD6Q53TS8 623 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 CYFIP1Q7L576 1253 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 DBNDD1Q9H9R9 158 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 PI4KBQ9UBF8 816 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 MRC1P22897 1456 aa14.33□□□□□ -0.12
SEC23A-201ENST00000307712 NFAT5O94916 1531 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 NVLO15381 856 aaKnown RBP14.32□□□□□ -0.12
SEC23A-201ENST00000307712 KRT19P08727 400 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 PYGMP11217 842 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 MAGEA4P43358 317 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 FNTAP49354 379 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 ARSEP51690 589 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 STAT2P52630 851 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 RINT1Q6NUQ1 792 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 MIGA2Q7L4E1 593 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 TSNARE1Q96NA8 513 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 VCX3AQ9NNX9 186 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 AGPAT3Q9NRZ7 376 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 TAS2R14Q9NYV8 317 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 PNMA3Q9UL41 463 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 CCPG1Q9ULG6 757 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 TRIM33Q9UPN9 1127 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 NID2Q14112 1375 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 H7C0C1 242 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 RBAK-RBAKDNI3L0D1 243 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 RFX1P22670 979 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 ATP5OP48047 213 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 HADHQ16836 314 aaKnown RBP14.32□□□□□ -0.12
SEC23A-201ENST00000307712 ERICH1Q86X53 443 aa14.32□□□□□ -0.12
SEC23A-201ENST00000307712 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms