RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 CAVIN3Q969G5 261 aa12.03□□□□□ -0.48
IDH3A-201ENST00000299518 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
IDH3A-201ENST00000299518 DBR1Q9UK59 544 aaKnown RBP12.03□□□□□ -0.48
IDH3A-201ENST00000299518 ATP8A1Q9Y2Q0 1164 aa12.03□□□□□ -0.48
IDH3A-201ENST00000299518 MARK3P27448 753 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.48
IDH3A-201ENST00000299518 ACTR2P61160 394 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.48
IDH3A-201ENST00000299518 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 TMEM206Q9H813 350 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 PICK1Q9NRD5 415 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 DNAJC17Q9NVM6 304 aaKnown RBP12.02□□□□□ -0.48
IDH3A-201ENST00000299518 KCND2Q9NZV8 630 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 NOCTQ9UK39 431 aaKnown RBP12.02□□□□□ -0.48
IDH3A-201ENST00000299518 GRIN2DO15399 1336 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 UMODL1Q5DID0 1318 aa12.02□□□□□ -0.48
IDH3A-201ENST00000299518 BTNL10A8MVZ5 291 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 GJB1P08034 283 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 TMOD1P28289 359 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 HOXA7P31268 230 aaPredicted RBP12.02□□□□□ -0.49
IDH3A-201ENST00000299518 BAG6P46379 1132 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 C10orf76Q5T2E6 689 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 TTC27Q6P3X3 843 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 PRUNE1Q86TP1 453 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 TRIM50Q86XT4 487 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 REPS2Q8NFH8 660 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 HELQQ8TDG4 1101 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 CYP39A1Q9NYL5 469 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 ANKRD62A6NC57 917 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 NCKAP1LP55160 1127 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 ZNF280AP59817 542 aaPredicted RBP12.02□□□□□ -0.49
IDH3A-201ENST00000299518 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.49
IDH3A-201ENST00000299518 SNX1Q13596 522 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 MSL3Q8N5Y2 521 aaKnown RBP12.02□□□□□ -0.49
IDH3A-201ENST00000299518 PBKQ96KB5 322 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 HERPUD2Q9BSE4 406 aa12.02□□□□□ -0.49
IDH3A-201ENST00000299518 POLR3FQ9H1D9 316 aaPredicted RBP12.02□□□□□ -0.49
IDH3A-201ENST00000299518 PLTPP55058 493 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 NUP85Q9BW27 656 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 JPH1Q9HDC5 661 aaPredicted RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 SHBGP04278 402 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 CYP11B1P15538 503 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 GJC1P36383 396 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 NFIL3Q16649 462 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 BCAS4Q8TDM0 211 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 ISCUQ9H1K1 167 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 RLFQ13129 1914 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 LRRIQ4A6NIV6 560 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 GLE1Q53GS7 698 aaKnown RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 ATG4AQ8WYN0 398 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 ZNF653Q96CK0 615 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 RNF14Q9UBS8 474 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 TRPC6Q9Y210 931 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 MAPTP10636 758 aaKnown RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 CTNNA1P35221 906 aaKnown RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 PWWP2AQ96N64 755 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 KLHL11Q9NVR0 708 aa12.01□□□□□ -0.49
IDH3A-201ENST00000299518 RRP15Q9Y3B9 282 aaKnown RBP12.01□□□□□ -0.49
IDH3A-201ENST00000299518 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
IDH3A-201ENST00000299518 POU5F1Q01860 360 aaKnown RBP12□□□□□ -0.49
IDH3A-201ENST00000299518 IFI16Q16666 785 aaKnown RBP12□□□□□ -0.49
IDH3A-201ENST00000299518 ZNF394Q53GI3 561 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 FAM71AQ8IYT1 594 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 FAM212AQ96EL1 285 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 PAGR1Q9BTK6 254 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
IDH3A-201ENST00000299518 CYP26B1Q9NR63 512 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 RAB20Q9NX57 234 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
IDH3A-201ENST00000299518 PGK2P07205 417 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 TNNI1P19237 187 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 CCND2P30279 289 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 SMTNP53814 917 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 KRT39Q6A163 491 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 MAP4K3Q8IVH8 894 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 RASGEF1CQ8N431 466 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 FBXO25Q8TCJ0 367 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 C1orf54Q8WWF1 131 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 SLC9A2Q9UBY0 812 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 NCANO14594 1321 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 MYO1CO00159 1063 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 MYO1FO00160 1098 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 DSG3P32926 999 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 VPS41P49754 854 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 KRT76Q01546 638 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 PRELID2Q8N945 189 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 NEK9Q8TD19 979 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 UBE4BO95155 1302 aa12□□□□□ -0.49
IDH3A-201ENST00000299518 GPC5P78333 572 aa11.99□□□□□ -0.49
IDH3A-201ENST00000299518 CYP24A1Q07973 514 aa11.99□□□□□ -0.49
IDH3A-201ENST00000299518 ZNF844Q08AG5 666 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms