RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 ZMYND10O75800 440 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 EFEMP2O95967 443 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 RCAN1P53805 252 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 LILRA6Q6PI73 481 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 PARM1Q6UWI2 310 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 FGF14Q92915 247 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 SH2D3AQ9BRG2 576 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
SPC25-201ENST00000282074 FAM126AQ9BYI3 521 aaPredicted RBP13.41□□□□□ -0.26
SPC25-201ENST00000282074 IFT122Q9HBG6 1241 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 GMEB2Q9UKD1 530 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 COL4A3BPQ9Y5P4 624 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 CHD8Q9HCK8 2581 aa13.41□□□□□ -0.26
SPC25-201ENST00000282074 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 STBD1O95210 358 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 ADRB1P08588 477 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 CDC27P30260 824 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 EXOSC10Q01780 885 aaKnown RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 DSC1Q08554 894 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 NCBP1Q09161 790 aaKnown RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 ST13P5Q8NFI4 369 aaPredicted RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 SLC7A3Q8WY07 619 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
SPC25-201ENST00000282074 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 NAP1L2Q9ULW6 460 aaPredicted RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
SPC25-201ENST00000282074 TMEM150BA6NC51 233 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 LILRB5O75023 590 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 PSMD10O75832 226 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 SRGAP2CP0DJJ0 459 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
SPC25-201ENST00000282074 PSMC5P62195 406 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
SPC25-201ENST00000282074 GRASPQ7Z6J2 395 aaPredicted RBP13.39□□□□□ -0.27
SPC25-201ENST00000282074 GLYCTKQ8IVS8 523 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 PSPC1Q8WXF1 523 aaKnown RBP13.39□□□□□ -0.27
SPC25-201ENST00000282074 NELL1Q92832 810 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 RAB23Q9ULC3 237 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 MRPS17Q9Y2R5 130 aaKnown RBP13.39□□□□□ -0.27
SPC25-201ENST00000282074 MIA3Q5JRA6 1907 aa13.39□□□□□ -0.27
SPC25-201ENST00000282074 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
SPC25-201ENST00000282074 ASAP2O43150 1006 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPC25-201ENST00000282074 XYLBO75191 536 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 ERLIN2O94905 339 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 HNRNPA1P09651 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPC25-201ENST00000282074 AXLP30530 894 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 MLH1P40692 756 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
SPC25-201ENST00000282074 NRLP54845 237 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 FGD1P98174 961 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 PCBP1Q15365 356 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPC25-201ENST00000282074 Q4G0T1 1027 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 FUT10Q6P4F1 479 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 ANO5Q75V66 913 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 HACE1Q8IYU2 909 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
SPC25-201ENST00000282074 CCDC148Q8NFR7 591 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
SPC25-201ENST00000282074 FGF13Q92913 245 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 CLDN23Q96B33 292 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 GAD1Q99259 594 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 GPR62Q9BZJ7 368 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 ADAM28Q9UKQ2 775 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 PPME1Q9Y570 386 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 IPPQ9Y573 584 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
SPC25-201ENST00000282074 PRPF3O43395 683 aaKnown RBP13.37□□□□□ -0.27
SPC25-201ENST00000282074 TADA2AO75478 443 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 CD72P21854 359 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 SCNN1GP51170 649 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 LAMTOR4Q0VGL1 99 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 PPM1LQ5SGD2 360 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 ZNF852Q6ZMS4 543 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 GJA10Q969M2 543 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 CCDC51Q96ER9 411 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 TCEANC2Q96MN5 208 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 GIT1Q9Y2X7 761 aa13.37□□□□□ -0.27
SPC25-201ENST00000282074 RPL17P18621 184 aaKnown RBP13.36□□□□□ -0.27
SPC25-201ENST00000282074 TGM1P22735 817 aa13.36□□□□□ -0.27
SPC25-201ENST00000282074 HOXA9P31269 272 aa13.36□□□□□ -0.27
SPC25-201ENST00000282074 RFC5P40937 340 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms