RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 AUTS2Q8WXX7 1259 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 EDAQ92838 391 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 FAM122AQ96E09 287 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 CCDC43Q96MW1 224 aaKnown RBP10.79□□□□□ -0.68
VPS41-201ENST00000265745 FAM193BQ96PV7 902 aaPredicted RBP10.79□□□□□ -0.68
VPS41-201ENST00000265745 GAD1Q99259 594 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 TMEM175Q9BSA9 504 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
VPS41-201ENST00000265745 ADAM7Q9H2U9 754 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 GPRC5CQ9NQ84 441 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 FAN1Q9Y2M0 1017 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 HES2Q9Y543 173 aa10.79□□□□□ -0.68
VPS41-201ENST00000265745 MYH9P35579 1960 aaKnown RBP10.78□□□□□ -0.68
VPS41-201ENST00000265745 NRP1O14786 923 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 C7P10643 843 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 CYP11B2P19099 503 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 U2AF2P26368 475 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS41-201ENST00000265745 CA8P35219 290 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 MLH1P40692 756 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 ITIH3Q06033 890 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 DSC1Q08554 894 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 PTPN14Q15678 1187 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 CES5AQ6NT32 575 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 HFE2Q6ZVN8 426 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 COLGALT2Q8IYK4 626 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 TMEM87AQ8NBN3 555 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 GSTCDQ8NEC7 633 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 MCPH1Q8NEM0 835 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 ERMNQ8TAM6 284 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 FZD8Q9H461 694 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 MIOSQ9NXC5 875 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 STK39Q9UEW8 545 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 CDH22Q9UJ99 828 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 GIT1Q9Y2X7 761 aa10.78□□□□□ -0.68
VPS41-201ENST00000265745 NLRC5Q86WI3 1866 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 EFEMP2O95967 443 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 EPCAMP16422 314 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 MUTP22033 750 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 TOB1P50616 345 aaPredicted RBP10.77□□□□□ -0.69
VPS41-201ENST00000265745 ZXDAP98168 799 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
VPS41-201ENST00000265745 PDIA5Q14554 519 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 ECM1Q16610 540 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 CDCA2Q69YH5 1023 aaPredicted RBP10.77□□□□□ -0.69
VPS41-201ENST00000265745 SLC27A1Q6PCB7 646 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 PPFIBP1Q86W92 1011 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
VPS41-201ENST00000265745 ZFP42Q96MM3 310 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 NECTIN4Q96NY8 510 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 KLHL5Q96PQ7 755 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 TRIM6Q9C030 488 aaPredicted RBP10.77□□□□□ -0.69
VPS41-201ENST00000265745 NXF3Q9H4D5 531 aaKnown RBP10.77□□□□□ -0.69
VPS41-201ENST00000265745 MARCH5Q9NX47 278 aa10.77□□□□□ -0.69
VPS41-201ENST00000265745 FNDC1Q4ZHG4 1894 aaPredicted RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 SOD2P04179 222 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 SSBP05455 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS41-201ENST00000265745 CNPP09543 421 aaKnown RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 AKAP5P24588 427 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 KLRC2P26717 231 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 OR1G1P47890 313 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 SCNN1GP51170 649 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 ATAT1Q5SQI0 421 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 KANK3Q6NY19 840 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 TAS1R1Q7RTX1 841 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 BMP8AQ7Z5Y6 402 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 CDR2LQ86X02 465 aaPredicted RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 HACE1Q8IYU2 909 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 RNF168Q8IYW5 571 aaPredicted RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 BSNDQ8WZ55 320 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 MFSD14AQ96MC6 490 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 EMILIN2Q9BXX0 1053 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 POMKQ9H5K3 350 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 MRPL17Q9NRX2 175 aaKnown RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 PRMT7Q9NVM4 692 aaPredicted RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 LRWD1Q9UFC0 647 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 NOL7Q9UMY1 257 aaKnown RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 PRG3Q9Y2Y8 225 aaPredicted RBP10.76□□□□□ -0.69
VPS41-201ENST00000265745 PCDHB6Q9Y5E3 794 aa10.76□□□□□ -0.69
VPS41-201ENST00000265745 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 ARHGEF35A5YM69 484 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 F8W810 466 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 ACKR2O00590 384 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 NR1I2O75469 434 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 NPTXRO95502 500 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 WEE2P0C1S8 567 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 CCT6AP40227 531 aaKnown RBP10.75□□□□□ -0.69
VPS41-201ENST00000265745 MTHFRP42898 656 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 NAMPTP43490 491 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 CLCN4P51793 760 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 RABEP1Q15276 862 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 RARS2Q5T160 578 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms