RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 EDRF1Q3B7T1 1238 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 ZNF568Q3ZCX4 644 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 ECHDC2Q86YB7 292 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 NPAS4Q8IUM7 802 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 SYCP3Q8IZU3 236 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 SMG8Q8ND04 991 aaKnown RBP15.43■□□□□ 0.06
VPS25-201ENST00000253794 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 ZBTB45Q96K62 511 aaPredicted RBP15.43■□□□□ 0.06
VPS25-201ENST00000253794 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 PCDHB2Q9Y5E7 798 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 TTC3P53804 2025 aa15.43■□□□□ 0.06
VPS25-201ENST00000253794 COL4A6Q14031 1691 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 TISP43B9A030 160 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 PSMA7O14818 248 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 OGTO15294 1046 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 INPPL1O15357 1258 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 NPTXRO95502 500 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 AMHP03971 560 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 GRM5P41594 1212 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 LRRC63Q05C16 580 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 ISM2Q6H9L7 571 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.42■□□□□ 0.062e-16■■■□□ 18.6
VPS25-201ENST00000253794 CDR2LQ86X02 465 aaPredicted RBP15.42■□□□□ 0.06
VPS25-201ENST00000253794 NELFCDQ8IXH7 590 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 ZC3H3Q8IXZ2 948 aaKnown RBP15.42■□□□□ 0.06
VPS25-201ENST00000253794 TOP1MTQ969P6 601 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 FBXL18Q96ME1 805 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 SLC9A7Q96T83 725 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 SEMA6BQ9H3T3 888 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 DMAC2Q9NW81 257 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 CXXC1Q9P0U4 656 aaPredicted RBP15.42■□□□□ 0.06
VPS25-201ENST00000253794 IPPQ9Y573 584 aa15.42■□□□□ 0.06
VPS25-201ENST00000253794 LDHAP00338 332 aaKnown RBP15.41■□□□□ 0.06
VPS25-201ENST00000253794 ADRB2P07550 413 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 CCNE1P24864 410 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 KCNJ6P48051 423 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 TMEM132AQ24JP5 1023 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 DPCR1Q3MIW9 517 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 C9orf50Q5SZB4 431 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 HACE1Q8IYU2 909 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 PGBD4Q96DM1 585 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 TCHPQ9BT92 498 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 FUCA2Q9BTY2 467 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 TRIM6Q9C030 488 aaPredicted RBP15.41■□□□□ 0.06
VPS25-201ENST00000253794 UBE2OQ9C0C9 1292 aaKnown RBP15.41■□□□□ 0.06
VPS25-201ENST00000253794 NXF3Q9H4D5 531 aaKnown RBP15.41■□□□□ 0.06
VPS25-201ENST00000253794 RC3H2Q9HBD1 1191 aaKnown RBP15.41■□□□□ 0.06
VPS25-201ENST00000253794 UBN1Q9NPG3 1134 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 ANKFY1Q9P2R3 1169 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 DACH1Q9UI36 760 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 MAPK8IP1Q9UQF2 711 aa15.41■□□□□ 0.06
VPS25-201ENST00000253794 A0A1W2PPC1 479 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 HOXA2O43364 376 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 CALUO43852 315 aaPredicted RBP15.4■□□□□ 0.06
VPS25-201ENST00000253794 CLTAP09496 248 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 STAG3L1P0CL83 205 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 ERCC5P28715 1186 aaPredicted RBP15.4■□□□□ 0.06
VPS25-201ENST00000253794 MCCD1P59942 119 aaPredicted RBP15.4■□□□□ 0.06
VPS25-201ENST00000253794 DEFB103AP81534 67 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 HSP90AA2PQ14568 343 aaPredicted RBP15.4■□□□□ 0.06
VPS25-201ENST00000253794 SHHQ15465 462 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 STX1AQ16623 288 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 XKR4Q5GH76 650 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 ARMCX5Q6P1M9 558 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 SASS6Q6UVJ0 657 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 AGMOQ6ZNB7 445 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 P2RX5Q93086 422 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 CBWD1Q9BRT8 395 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 KIAA1586Q9HCI6 787 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 RNF19AQ9NV58 838 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 ANO10Q9NW15 660 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 CPSF3Q9UKF6 684 aaKnown RBP15.4■□□□□ 0.06
VPS25-201ENST00000253794 AGO2Q9UKV8 859 aaKnown RBP15.4■□□□□ 0.06
VPS25-201ENST00000253794 GIT1Q9Y2X7 761 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 SLC4A7Q9Y6M7 1214 aa15.4■□□□□ 0.06
VPS25-201ENST00000253794 BICDL2A1A5D9 508 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 MAPK13O15264 365 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 EXTL3O43909 919 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 GJB5O95377 273 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 PMS1P54277 932 aaKnown RBP15.39■□□□□ 0.05
VPS25-201ENST00000253794 HTRA4P83105 476 aaPredicted RBP15.39■□□□□ 0.05
VPS25-201ENST00000253794 PAK1Q13153 545 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 ZSCAN23Q3MJ62 389 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 TTI2Q6NXR4 508 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 CRELD2Q6UXH1 353 aaPredicted RBP15.39■□□□□ 0.05
VPS25-201ENST00000253794 ZBTB33Q86T24 672 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 GPD1LQ8N335 351 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 CEP120Q8N960 986 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 ZNF689Q96CS4 500 aaPredicted RBP15.39■□□□□ 0.05
VPS25-201ENST00000253794 RNPC3Q96LT9 517 aaKnown RBP15.39■□□□□ 0.05
VPS25-201ENST00000253794 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 HSPBP1Q9NZL4 362 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 RWDD2AQ9UIY3 292 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 PCDHB7Q9Y5E2 793 aa15.39■□□□□ 0.05
VPS25-201ENST00000253794 ZBBXA8MT70 800 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms