RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 HLA-DPA1P20036 260 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 HARS2P49590 506 aaKnown RBP11.18□□□□□ -0.62
TRPS1-201ENST00000220888 AMPD2Q01433 879 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 TMEM132DQ14C87 1099 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 WDR72Q3MJ13 1102 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
TRPS1-201ENST00000220888 OPTNQ96CV9 577 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 AP1M1Q9BXS5 423 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 TMEM63CQ9P1W3 806 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 C5orf58C9J3I9 102 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 PODXLO00592 558 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 C2CD2LO14523 706 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 FGGP02679 453 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 MYBL1P10243 752 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 TMEM62Q0P6H9 643 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 BFSP2Q13515 415 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 NT5DC4Q86YG4 428 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 PPHLN1Q8NEY8 458 aaKnown RBP11.18□□□□□ -0.62
TRPS1-201ENST00000220888 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 YME1L1Q96TA2 773 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 MAP10Q9P2G4 905 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 DPP7Q9UHL4 492 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 APOBEC2Q9Y235 224 aaKnown RBP11.18□□□□□ -0.62
TRPS1-201ENST00000220888 SYNGAP1Q96PV0 1343 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
TRPS1-201ENST00000220888 A0A087WWV3 80 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ZNF263O14978 683 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 SKIP12755 728 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 AARSP49588 968 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 KNOP1Q1ED39 458 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ANLNQ9NQW6 1124 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ZNF70Q9UC06 446 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 RNASEH1O60930 286 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ACSL3O95573 720 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 EEF1DP29692 281 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 E2F5Q15329 346 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 KLHL38Q2WGJ6 581 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TMCO5AQ8N6Q1 288 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 DACH2Q96NX9 599 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 CNOT10Q9H9A5 744 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 GIMAP4Q9NUV9 329 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TMEM260Q9NX78 707 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 CPDO75976 1380 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 POTEFA5A3E0 1075 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 CTNND1O60716 968 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 YWHABP31946 246 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TAP1Q03518 808 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 KRT72Q14CN4 511 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 VPS72Q15906 364 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 CEP55Q53EZ4 464 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 POTEEQ6S8J3 1075 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TBC1D1Q86TI0 1168 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 DDIASQ8IXT1 998 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TBC1D16Q8TBP0 767 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 MED15Q96RN5 788 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 LATS2Q9NRM7 1088 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 CAPN11Q9UMQ6 739 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 PRR23AA6NEV1 266 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 HOXA2O43364 376 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 AKR1B1P15121 316 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 SLC8A1P32418 973 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 USP11P51784 963 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 CDH6P55285 790 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 COASYQ13057 564 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 LAMB3Q13751 1172 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
TRPS1-201ENST00000220888 KDELC2Q7Z4H8 507 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 BTBD6Q96KE9 485 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 SYTL2Q9HCH5 934 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 TXLNGQ9NUQ3 528 aa11.17□□□□□ -0.62
TRPS1-201ENST00000220888 ENTPD3O75355 529 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 DGAT1O75907 488 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 HMOX2P30519 316 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 C2orf54Q08AI8 447 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 DPCR1Q3MIW9 517 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 SV2CQ496J9 727 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 PDXDC1Q6P996 788 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 MMS22LQ6ZRQ5 1243 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 FBXO41Q8TF61 875 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 SLC25A13Q9UJS0 675 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
TRPS1-201ENST00000220888 PVALEFA0A1B0GWK0 134 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 SETSIPP0DME0 302 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 EIF3BP55884 814 aaKnown RBP11.16□□□□□ -0.62
TRPS1-201ENST00000220888 TWF1Q12792 350 aa11.16□□□□□ -0.62
TRPS1-201ENST00000220888 MFSD4BQ5TF39 518 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms