RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 PrkcbP68404 671 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Cct6aP80317 531 aaKnown RBP13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Znf827Q505G8 1078 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Grxcr1Q50H32 290 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Mief2Q5NCS9 454 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Ntan1Q64311 310 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Cyp3a11Q64459 504 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 C6.1alQ7M757 291 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Sh3tc2Q80VA5 1289 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Pi4kbQ8BKC8 816 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Tcaf1Q8BNE1 924 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 PisdQ8BSF4 406 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Ccdc169Q8BXX9 214 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Brd3Q8K2F0 726 aaKnown RBP13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Matr3Q8K310 846 aaKnown RBP13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Mtmr6Q8VE11 617 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 CbsQ91WT9 561 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Ankef1Q9D2J7 775 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Mfap3lQ9D3X9 409 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Drc3Q9D5E4 523 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 1700016D06RikQ9DAA5 166 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 FignQ9ERZ6 759 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Slfn14V9GXG1 899 aa13.47□□□□□ -0.25
Trim50-202ENSMUST00000111180 Odf2A3KGV1 830 aaKnown RBP13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Arhgef26D3YYY8 869 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 PtenO08586 403 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Calb1P12658 261 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 ProcP33587 460 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Hoxb13P70321 286 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Cyp11b1Q3TG86 501 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 March9Q3TZ87 348 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Tgfbrap1Q3UR70 860 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 P3h1Q3V1T4 739 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Q5XFZ0 217 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 PtprcapQ64697 197 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Tmem202Q80W35 275 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Map3k11Q80XI6 850 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Dclk3Q8BWQ5 790 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 VcpkmtQ8C436 228 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 AagabQ8R2R3 316 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Atg13Q91YI1 516 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Adam33Q923W9 797 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Tbc1d15Q9CXF4 671 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Zfp623Q9CY99 499 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 TtpalQ9D3D0 343 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Pus10Q9D3U0 527 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Sdr42e1Q9D665 394 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Rwdd2aQ9D9S3 292 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Atp13a1Q9EPE9 1200 aaKnown RBP13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Asah2Q9JHE3 756 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Cnga3Q9JJZ8 631 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Fmnl1Q9JL26 1094 aa13.46□□□□□ -0.25
Trim50-202ENSMUST00000111180 Cdc6O89033 562 aaKnown RBP13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Gnrh1P13562 90 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 AdssP46664 456 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tbx3P70324 741 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Nucb2P81117 420 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Pla2g5P97391 137 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tcerg1lQ3B807 590 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Agxt2Q3UEG6 513 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 R3hdm4Q4VBF2 262 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Mbtd1Q6P5G3 631 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Arid5bQ8BM75 1188 aaKnown RBP13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 4933409G03RikQ8C5U0 320 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Gm5591Q8CDK1 855 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Klhl20Q8VCK5 604 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Snx10Q9CWT3 201 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 CenpsQ9D084 142 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Fthl17aQ9DAX0 182 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Wfdc1Q9ESH5 211 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Hs6st3Q9QYK4 470 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Klra10Q9R1G6 266 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Msl3Q9WVG9 525 aa13.45□□□□□ -0.26
Trim50-202ENSMUST00000111180 Gm6133B2RY53 190 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Plekha5E9Q6H8 1269 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tnfrsf11aO35305 625 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Mmp15O54732 657 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 RdxP26043 583 aaKnown RBP13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Abcd1P48410 736 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tnnt2P50752 301 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 CebpzP53569 1052 aaKnown RBP13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Wdr5P61965 334 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Mark2Q05512 776 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Hhla1Q3TYV2 514 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Atp13a4Q5XF90 1193 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tlr13Q6R5N8 991 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Ankfy1Q810B6 1169 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Ago2Q8CJG0 860 aaKnown RBP13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Ccdc14Q8K2J4 934 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Gtpbp4Q99ME9 634 aaKnown RBP13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Castor1Q9CWQ8 331 aa13.44□□□□□ -0.26
Trim50-202ENSMUST00000111180 Pds5aQ6A026 1332 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 A0A286YCQ6 122 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 Man1b1A2AJ15 658 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 Sec14l1A8Y5H7 715 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 Zfand4D3Z3C6 739 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 Hoxc8P09025 242 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 GcP21614 476 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 Cd86P42082 309 aa13.43□□□□□ -0.26
Trim50-202ENSMUST00000111180 Il1rapl1P59823 695 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms