RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 NfiaQ02780 532 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pbxip1Q3TVI8 727 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Xxylt1Q3U4G3 392 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Als2clQ60I26 952 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Runx1t1Q61909 577 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Miga2Q8BK03 593 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Osbpl6Q8BXR9 959 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rbm19Q8R3C6 952 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sorcs3Q8VI51 1219 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Hps4Q99KG7 671 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Barx2O08686 283 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Serpinb8O08800 374 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Olfm1O88998 485 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rag1P15919 1040 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arl4aP61213 200 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Kcnma1Q08460 1209 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trim80Q3V061 624 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trim56Q80VI1 734 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Zbtb1Q91VL9 713 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Itga2bQ9QUM0 1033 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Hic1Q9R1Y5 733 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Naaladl2A0A0N4SUJ3 795 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mcpt1P11034 246 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 RenbpP82343 430 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Krt35Q497I4 455 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 E2f8Q58FA4 860 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tbc1d12Q6A039 696 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Lrrc1Q80VQ1 524 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Kbtbd13Q8C828 458 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 ThtpaQ8JZL3 224 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nek8Q91ZR4 698 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rpa3Q9CQ71 121 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Stx17Q9D0I4 301 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trmt112Q9DCG9 125 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sh2d3cQ9QZS8 854 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Klhl18A0A0G2JGN5 579 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm3248K7N721 186 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Bnc1O35914 961 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 SagP20443 403 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyp19a1P28649 503 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 RxrgP28705 463 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rcn1Q05186 325 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cul4aQ3TCH7 759 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 TraddQ3U0V2 310 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyp2d12Q8BVD2 504 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 AopepQ8BXQ6 817 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ppp1r14cQ8R4S0 164 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Clptm1Q8VBZ3 664 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PudpQ9D5U5 234 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 IscuQ9D7P6 168 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q9D937 123 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Fthl17aQ9DAX0 182 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ccnt1Q9QWV9 724 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyth1Q9QX11 398 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tspyl1O88852 379 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Wee1P47810 646 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Casp4P70343 373 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Serpina5P70458 405 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 AcadsQ07417 412 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rps6ka6Q7TPS0 764 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Skida1Q80YR3 822 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Psmd5Q8BJY1 504 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 4932411N23RikQ8C0S0 470 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 P3h2Q8CG71 703 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Med15Q924H2 789 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rprd1bQ9CSU0 326 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 CrotQ9DC50 612 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Dusp10Q9ESS0 483 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PodxlQ9R0M4 503 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Osbpl9A2A8Z1 736 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rfx8D3YU81 596 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 CatspereP0DP43 985 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pla2g4aP47713 748 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Krt80Q0VBK2 452 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q3KNL4 93 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Parp6Q6P6P7 630 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rbm15bQ6PHZ5 887 aaKnown RBP4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slc4a7Q8BTY2 1034 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ints9Q8K114 658 aaKnown RBP4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cadm1Q8R5M8 456 aaKnown RBP4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rnf31Q924T7 1066 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pstpip2Q99M15 334 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Polr3eQ9CZT4 710 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Adck1Q9D0L4 525 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 EtfbQ9DCW4 255 aaKnown RBP4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Krt78E9Q0F0 1068 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Abce1P61222 599 aaKnown RBP4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Abi2P62484 446 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Clec4fP70194 548 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PighQ5M9N4 188 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pcdhb14Q6PB90 796 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Serpina9Q9D7D2 418 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Orc6Q9WUJ8 262 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Adamtsl3G3UXC7 1706 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PtprvP70289 1705 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nfatc2ipO09130 412 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mapkapk5O54992 473 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Calb2Q08331 271 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 OsbpQ3B7Z2 805 aa4.81□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ddx3xQ62167 662 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms