RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Pnma2Q8BHK0 365 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Slc41a1Q8BJA2 512 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Me3Q8BMF3 604 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Pwp2Q8BU03 919 aaKnown RBP18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 SgczQ8BX51 311 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Plekhh3Q8VCE9 796 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 SrrtQ99MR6 875 aaKnown RBP18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Ascl3Q9JJR7 174 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Igbp1bQ9QZ29 343 aa18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Ttc3O88196 1979 aaKnown RBP18.61■□□□□ 0.57
Trim54-201ENSMUST00000013771 Gm45194A0A140LJG2 572 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 BC049352E9Q2Z6 85 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Got1P05201 413 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Cdh15P33146 784 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 PrkcbP68404 671 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Gpr15Q0VDU3 360 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Prdm6Q3UZD5 596 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Cyp2c66Q5GLZ0 490 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Leo1Q5XJE5 667 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Mpp4Q6P7F1 635 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Reps2Q80XA6 521 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Btnl9Q8BJE2 536 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Matr3Q8K310 846 aaKnown RBP18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Stxbp5Q8K400 1152 aaKnown RBP18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Mcrs1Q99L90 462 aa18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Top3bQ9Z321 862 aaKnown RBP18.6■□□□□ 0.57
Trim54-201ENSMUST00000013771 Klhdc7bA0A286YD60 1263 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Efna5O08543 228 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Orc4O88708 433 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Lsp1P19973 330 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Lbx1P52955 282 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Sash1P59808 1230 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Ube2hP62257 183 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Nat8lQ3UGX3 299 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Snx25Q3ZT31 840 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Nap1l3Q794H2 544 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Ddx19bQ8BZY3 494 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Tbc1d10cQ8C9V1 444 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Tbc1d14Q8CGA2 694 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Fuca1Q99LJ1 452 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Med4Q9CQA5 270 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 ZwintQ9CQU5 252 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Snrnp35Q9D384 244 aa18.59■□□□□ 0.57
Trim54-201ENSMUST00000013771 Nudt1P53368 156 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Shkbp1Q6P7W2 704 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Dzip3Q7TPV2 1204 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Tmc3Q7TQ69 1130 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Kct2Q8K201 259 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Tspyl4Q8VD63 406 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Dqx1Q924H9 718 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 4931400O07RikQ9D4M5 137 aa18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Mki67E9PVX6 3177 aaKnown RBP18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Chd7A2AJK6 2986 aaKnown RBP18.58■□□□□ 0.57
Trim54-201ENSMUST00000013771 Myh11O08638 1972 aa18.58■□□□□ 0.56
Trim54-201ENSMUST00000013771 Grem1O70326 184 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Scarf1Q5ND28 820 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Ifit1Q64282 463 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Smoc1Q8BLY1 463 aaKnown RBP18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Sec62Q8BU14 398 aaKnown RBP18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Tada2aQ8CHV6 443 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Syt12Q920N7 421 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Phtf1Q9QZ09 761 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Cd97Q9Z0M6 818 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Sf3b1Q99NB9 1304 aaKnown RBP18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Adamts20P59511 1906 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Krt36B1AQ75 473 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 2010300C02RikE9Q3M9 1175 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Mcm7Q61881 719 aaKnown RBP18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Casd1Q7TN73 797 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Rexo1Q7TT28 1213 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Lrfn2Q80TG9 788 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Fam20aQ8CID3 541 aa18.57■□□□□ 0.56
Trim54-201ENSMUST00000013771 Zfhx2Q2MHN3 2562 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 1700018F24RikB2RW27 314 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Ppfia4B8QI36 1187 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Vmn2r78K7N6U5 853 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Gadd45bP22339 160 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Cd68P31996 326 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Dbx1P52950 335 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Plxna3P70208 1872 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Bahd1Q497V6 772 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 G2e3Q5RJY2 716 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Mxd4Q60948 209 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Mtss1lQ6P9S0 715 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Prpf38bQ80SY5 542 aaKnown RBP18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 HomezQ80W88 542 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Phka2Q8BWJ3 1235 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Cstf2tQ8C7E9 632 aaKnown RBP18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Frat2Q8K025 231 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Pip4k2cQ91XU3 421 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Mmtag2Q99LX5 260 aaKnown RBP18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Oxct1Q9D0K2 520 aaKnown RBP18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Q9D1F3 157 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Phf14Q9D4H9 881 aa18.56■□□□□ 0.56
Trim54-201ENSMUST00000013771 Ktn1Q61595 1327 aaKnown RBP18.55■□□□□ 0.56
Trim54-201ENSMUST00000013771 Cntnap4Q99P47 1310 aa18.55■□□□□ 0.56
Trim54-201ENSMUST00000013771 Fibcd1A2AV25 459 aa18.55■□□□□ 0.56
Trim54-201ENSMUST00000013771 Arhgap6O54834 987 aa18.55■□□□□ 0.56
Trim54-201ENSMUST00000013771 P01734 135 aa18.55■□□□□ 0.56
Trim54-201ENSMUST00000013771 FechP22315 420 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms