RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 CntrobQ8CB62 887 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gtpbp10Q8K013 366 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Trim68Q8K243 485 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Cuedc2Q9CXX9 284 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 PpihQ9D868 188 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Trmt112Q9DCG9 125 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 PycardQ9EPB4 193 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Rsc1a1Q9ER99 582 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Tmem191cQ9JJB1 302 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Tlr2Q9QUN7 784 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Klrc2Q9WTJ9 238 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 TicrrQ8BQ33 1889 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gm4297D3YWB7 211 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Fam47eD3YWC7 402 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 AurkbO70126 345 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Aff1O88573 1216 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 GzmgP13366 248 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Dcaf17Q3TUL7 519 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Gigyf2Q6Y7W8 1291 aaKnown RBP12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 SnphQ80U23 495 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 NrcamQ810U4 1256 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Slc26a7Q8R2Z3 656 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Lrrc8cQ8R502 803 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Lrrc14Q8VC16 493 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Sec14l2Q99J08 403 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Acsl3Q9CZW4 720 aaKnown RBP12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Prss23Q9D6X6 382 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Tbx18Q9EPZ6 613 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Slc8a3S4R2P9 928 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Usp31E9Q6Y8 1344 aa12.9□□□□□ -0.34
Ufd1-201ENSMUST00000005394 Tex13c2A0A0G2JGA3 530 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gm30191A0A0U1RNT7 187 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 1700016G14RikA0A286YCZ6 238 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mroh8E9PYI4 1049 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rag1P15919 1040 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ccng1P51945 294 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Serping1P97290 504 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Creb1Q01147 341 aaKnown RBP12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zfp957Q3UT76 567 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam81aQ3UXZ6 364 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tom1l2Q5SRX1 507 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ugt1a1Q63886 535 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 IgflQ6B9Z0 140 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Atl2Q6PA06 583 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ppp2r5aQ6PD03 486 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Clca4aQ6Q473 924 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Q80WR5 230 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tmem179Q8BHH9 233 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Phf20Q8BLG0 1010 aaKnown RBP12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pcdh18Q8VHR0 1134 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 PdgfdQ925I7 370 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ptdss1Q99LH2 473 aaKnown RBP12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam187aQ9D3R5 417 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nudt12Q9DCN1 462 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ly6iQ9WU67 134 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pds5aQ6A026 1332 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Dock2Q8C3J5 1828 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Card9A2AIV8 536 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pdia2D3Z6P0 527 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Xbp1O35426 267 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pcdha4O88689 947 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Mpp3O88910 568 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fgfr1P16092 822 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 SobpQ0P5V2 864 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam83bQ0VBM2 1012 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Rnf113a2Q14B01 337 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tatdn3Q3U1C6 294 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Dab2ipQ3UHC7 1189 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cnga4Q3UW12 575 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ssxb10Q6XAR7 170 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ano5Q75UR0 904 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ankzf1Q80UU1 748 aaKnown RBP12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Ssh3Q8K330 649 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Tti1Q91V83 1085 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 YarsQ91WQ3 528 aaKnown RBP12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sugt1Q9CX34 336 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Galntl5Q9D4M9 431 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Sf3a3Q9D554 501 aaKnown RBP12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Klf15Q9EPW2 415 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cpb2Q9JHH6 422 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Slfn1Q9Z0I7 337 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pex11aQ9Z211 246 aa12.89□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Slc4a9E9PUP3 929 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Pdzrn4E9PUZ9 1014 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gnat1P20612 350 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Eef1dP57776 281 aaKnown RBP12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Edem3Q2HXL6 931 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nt5c2Q3V1L4 560 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Gucy2fQ5SDA5 1108 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Fam71bQ5STT6 665 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nlrp4eQ66X19 978 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cyp26b1Q811W2 512 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nop53Q8BK35 484 aaKnown RBP12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Onecut3Q8K557 490 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Zbtb44Q8R0A2 453 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Cacnb1Q8R3Z5 597 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Atp2a1Q8R429 994 aa12.88□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Nrxn2E9Q7X7 1710 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Oip5A2AQ14 241 aa12.87□□□□□ -0.35
Ufd1-201ENSMUST00000005394 Lrrc38A2VDH3 298 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms