RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 SFG1Q12507 346 aa-0.56□□□□□ -2.5
snR50snR50 SLH1P53327 1967 aaKnown RBP-0.56□□□□□ -2.5
snR50snR50 MET17P06106 444 aa-0.57□□□□□ -2.5
snR50snR50 IFM1P25038 676 aa-0.57□□□□□ -2.5
snR50snR50 DCC1P25559 380 aa-0.57□□□□□ -2.5
snR50snR50 TMA19P35691 167 aaKnown RBP-0.57□□□□□ -2.5
snR50snR50 GPX1P36014 167 aa-0.57□□□□□ -2.5
snR50snR50 KAP104P38217 918 aaKnown RBP-0.57□□□□□ -2.5
snR50snR50 PET8P38921 284 aa-0.57□□□□□ -2.5
snR50snR50 KRE29P40026 464 aa-0.57□□□□□ -2.5
snR50snR50 YIL012WP40551 113 aa-0.57□□□□□ -2.5
snR50snR50 IRC6P43615 237 aa-0.57□□□□□ -2.5
snR50snR50 MPP6P53725 186 aaPredicted RBP-0.57□□□□□ -2.5
snR50snR50 HCH1P53834 153 aa-0.57□□□□□ -2.5
snR50snR50 MRPL19P53875 158 aa-0.57□□□□□ -2.5
snR50snR50 SUB1P54000 292 aaKnown RBP-0.57□□□□□ -2.5
snR50snR50 IPK1Q06667 281 aa-0.57□□□□□ -2.5
snR50snR50 YPR078CQ06813 372 aa-0.57□□□□□ -2.5
snR50snR50 YLR012CQ07927 99 aa-0.57□□□□□ -2.5
snR50snR50 AKR2Q12013 749 aa-0.57□□□□□ -2.5
snR50snR50 YDR056CQ12025 205 aa-0.57□□□□□ -2.5
snR50snR50 YBL112CQ3E7Y4 105 aa-0.57□□□□□ -2.5
snR50snR50 MSB2P32334 1306 aa-0.58□□□□□ -2.5
snR50snR50 YHR139C-AO13536 103 aa-0.58□□□□□ -2.5
snR50snR50 RPS3P05750 240 aaKnown RBP-0.58□□□□□ -2.5
snR50snR50 DPB2P24482 689 aaPredicted RBP-0.58□□□□□ -2.5
snR50snR50 MXR2P25566 168 aa-0.58□□□□□ -2.5
snR50snR50 IMP1P28627 190 aa-0.58□□□□□ -2.5
snR50snR50 FAA1P30624 700 aaKnown RBP-0.58□□□□□ -2.5
snR50snR50 MSK1P32048 576 aa-0.58□□□□□ -2.5
snR50snR50 RPN12P32496 274 aa-0.58□□□□□ -2.5
snR50snR50 ERV15P38312 142 aa-0.58□□□□□ -2.5
snR50snR50 YHR177WP38867 453 aa-0.58□□□□□ -2.5
snR50snR50 YEA4P40004 342 aa-0.58□□□□□ -2.5
snR50snR50 AGE2P40529 298 aa-0.58□□□□□ -2.5
snR50snR50 YPT32P51996 222 aaKnown RBP-0.58□□□□□ -2.5
snR50snR50 TIM10P87108 93 aa-0.58□□□□□ -2.5
snR50snR50 YPL278CQ08990 100 aa-0.58□□□□□ -2.5
snR50snR50 ATO3Q12359 275 aa-0.58□□□□□ -2.5
snR50snR50 YNL146C-AQ3E7Z1 64 aa-0.58□□□□□ -2.5
snR50snR50 SRN2Q99176 213 aa-0.58□□□□□ -2.5
snR50snR50 PDE2P06776 526 aa-0.59□□□□□ -2.5
snR50snR50 RPS16AP0CX51 143 aaKnown RBP-0.59□□□□□ -2.5
snR50snR50 RPS16BP0CX52 143 aaKnown RBP-0.59□□□□□ -2.5
snR50snR50 UTR1P21373 530 aa-0.59□□□□□ -2.5
snR50snR50 GRR1P24814 1151 aa-0.59□□□□□ -2.5
snR50snR50 YCR025CP25352 136 aa-0.59□□□□□ -2.5
snR50snR50 URA7P28274 579 aaKnown RBP-0.59□□□□□ -2.5
snR50snR50 OAC1P32332 324 aa-0.59□□□□□ -2.5
snR50snR50 ERG2P32352 222 aa-0.59□□□□□ -2.5
snR50snR50 PEX32P38292 413 aa-0.59□□□□□ -2.5
snR50snR50 FAD1P38913 306 aa-0.59□□□□□ -2.5
snR50snR50 PRP39P39682 629 aaKnown RBP-0.59□□□□□ -2.5
snR50snR50 YIL001WP40560 513 aa-0.59□□□□□ -2.5
snR50snR50 YFL065CP43539 102 aa-0.59□□□□□ -2.5
snR50snR50 OST2P46964 130 aa-0.59□□□□□ -2.5
snR50snR50 NIF3P53081 288 aa-0.59□□□□□ -2.5
snR50snR50 YGR219WP53307 113 aa-0.59□□□□□ -2.5
snR50snR50 MAL13P53338 473 aa-0.59□□□□□ -2.5
snR50snR50 YNL247WP53852 767 aaKnown RBP-0.59□□□□□ -2.5
snR50snR50 YNL143CP53908 130 aa-0.59□□□□□ -2.5
snR50snR50 MEH1Q02205 184 aa-0.59□□□□□ -2.5
snR50snR50 MSA1Q08471 629 aa-0.59□□□□□ -2.5
snR50snR50 UAF30Q08747 228 aa-0.59□□□□□ -2.5
snR50snR50 GEP5Q12393 293 aa-0.59□□□□□ -2.5
snR50snR50 LAG2Q92325 660 aa-0.59□□□□□ -2.5
snR50snR50 Q0255P03881 472 aa-0.6□□□□□ -2.51
snR50snR50 YHR212W-AP0CX91 67 aa-0.6□□□□□ -2.51
snR50snR50 DBR1P24309 405 aaKnown RBP-0.6□□□□□ -2.51
snR50snR50 DPB3P27344 201 aa-0.6□□□□□ -2.51
snR50snR50 SWI3P32591 825 aa-0.6□□□□□ -2.51
snR50snR50 MDL1P33310 695 aa-0.6□□□□□ -2.51
snR50snR50 PRX1P34227 261 aaKnown RBP-0.6□□□□□ -2.51
snR50snR50 TEM1P38987 245 aa-0.6□□□□□ -2.51
snR50snR50 SOP4P39543 234 aaPredicted RBP-0.6□□□□□ -2.51
snR50snR50 VAB2P40003 282 aa-0.6□□□□□ -2.51
snR50snR50 SHQ1P40486 507 aaPredicted RBP-0.6□□□□□ -2.51
snR50snR50 SMD3P43321 101 aaKnown RBP-0.6□□□□□ -2.51
snR50snR50 TOS8P53147 276 aa-0.6□□□□□ -2.51
snR50snR50 MRS2Q01926 470 aa-0.6□□□□□ -2.51
snR50snR50 YPL039WQ03080 316 aa-0.6□□□□□ -2.51
snR50snR50 RSM10Q03201 203 aa-0.6□□□□□ -2.51
snR50snR50 VPS20Q04272 221 aa-0.6□□□□□ -2.51
snR50snR50 YLR446WQ06204 433 aa-0.6□□□□□ -2.51
snR50snR50 PSY3Q12318 242 aa-0.6□□□□□ -2.51
snR50snR50 PGA3Q12746 312 aaKnown RBP-0.6□□□□□ -2.51
snR50snR50 YRF1-4O13559 1382 aa-0.6□□□□□ -2.51
snR50snR50 RAD1P06777 1100 aa-0.61□□□□□ -2.51
snR50snR50 MRP7P12687 371 aa-0.61□□□□□ -2.51
snR50snR50 SPS100P13130 326 aa-0.61□□□□□ -2.51
snR50snR50 CKI1P20485 582 aa-0.61□□□□□ -2.51
snR50snR50 STP22P25604 385 aa-0.61□□□□□ -2.51
snR50snR50 RNP1P32385 249 aa-0.61□□□□□ -2.51
snR50snR50 MEI5P32489 222 aa-0.61□□□□□ -2.51
snR50snR50 ZRT1P32804 376 aa-0.61□□□□□ -2.51
snR50snR50 FZF1P32805 299 aa-0.61□□□□□ -2.51
snR50snR50 NFU1P32860 256 aa-0.61□□□□□ -2.51
snR50snR50 CSG2P35206 410 aa-0.61□□□□□ -2.51
snR50snR50 EBP2P36049 427 aaKnown RBP-0.61□□□□□ -2.51
snR50snR50 UIP5P36137 443 aa-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms