RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 CTR2P38865 189 aa-2.95□□□□□ -2.88
snR40snR40 PGD1P40356 397 aa-2.95□□□□□ -2.88
snR40snR40 SWT21P53873 357 aaPredicted RBP-2.95□□□□□ -2.88
snR40snR40 YLR460CP54007 376 aa-2.95□□□□□ -2.88
snR40snR40 YMR279CQ03263 540 aa-2.95□□□□□ -2.88
snR40snR40 SEC13Q04491 297 aaKnown RBP-2.95□□□□□ -2.88
snR40snR40 RNH203Q12338 110 aa-2.95□□□□□ -2.88
snR40snR40 UGA1P17649 471 aa-2.96□□□□□ -2.88
snR40snR40 YCL042WP25572 119 aa-2.96□□□□□ -2.88
snR40snR40 PTP2P29461 750 aa-2.96□□□□□ -2.88
snR40snR40 GPI10P30777 616 aa-2.96□□□□□ -2.88
snR40snR40 MRPL6P32904 214 aa-2.96□□□□□ -2.88
snR40snR40 BUD2P33314 1104 aa-2.96□□□□□ -2.88
snR40snR40 YHL037CP38733 133 aa-2.96□□□□□ -2.88
snR40snR40 YHR177WP38867 453 aa-2.96□□□□□ -2.88
snR40snR40 MET28P40573 187 aa-2.96□□□□□ -2.88
snR40snR40 AIM33Q04516 312 aa-2.96□□□□□ -2.88
snR40snR40 YPR203WQ08994 102 aa-2.96□□□□□ -2.88
snR40snR40 YPL245WQ12179 454 aaKnown RBP-2.96□□□□□ -2.88
snR40snR40 RUP1Q12242 671 aa-2.96□□□□□ -2.88
snR40snR40 RPN6Q12377 434 aa-2.96□□□□□ -2.88
snR40snR40 CDC36P06100 191 aaPredicted RBP-2.97□□□□□ -2.88
snR40snR40 PUP2P32379 260 aa-2.97□□□□□ -2.88
snR40snR40 SLC1P33333 303 aa-2.97□□□□□ -2.88
snR40snR40 MRPL15P36523 253 aa-2.97□□□□□ -2.88
snR40snR40 PAF1P38351 445 aa-2.97□□□□□ -2.88
snR40snR40 PHO89P38361 574 aa-2.97□□□□□ -2.88
snR40snR40 INM1P38710 295 aa-2.97□□□□□ -2.88
snR40snR40 DUO1P53168 247 aaKnown RBP-2.97□□□□□ -2.88
snR40snR40 CUS2P53830 285 aaPredicted RBP-2.97□□□□□ -2.88
snR40snR40 ATG29Q12092 213 aa-2.97□□□□□ -2.88
snR40snR40 GEP5Q12393 293 aa-2.97□□□□□ -2.88
snR40snR40 UTP20P35194 2493 aaKnown RBP-2.98□□□□□ -2.89
snR40snR40 RAD3P06839 778 aa-2.98□□□□□ -2.89
snR40snR40 MRPL8P22353 238 aa-2.98□□□□□ -2.89
snR40snR40 DPB2P24482 689 aaPredicted RBP-2.98□□□□□ -2.89
snR40snR40 YCR025CP25352 136 aa-2.98□□□□□ -2.89
snR40snR40 RRP7P25368 297 aaPredicted RBP-2.98□□□□□ -2.89
snR40snR40 AVT7P40501 490 aa-2.98□□□□□ -2.89
snR40snR40 PRP24P49960 444 aaKnown RBP-2.98□□□□□ -2.89
snR40snR40 YNL143CP53908 130 aa-2.98□□□□□ -2.89
snR40snR40 SEN15Q04675 128 aa-2.98□□□□□ -2.89
snR40snR40 YHR032W-AP0C5N6 59 aa-2.99□□□□□ -2.89
snR40snR40 RED1P14291 827 aa-2.99□□□□□ -2.89
snR40snR40 OSM1P21375 501 aaKnown RBP-2.99□□□□□ -2.89
snR40snR40 UIP5P36137 443 aa-2.99□□□□□ -2.89
snR40snR40 GPD2P41911 440 aaKnown RBP-2.99□□□□□ -2.89
snR40snR40 AIF1P52923 378 aa-2.99□□□□□ -2.89
snR40snR40 YPL039WQ03080 316 aa-2.99□□□□□ -2.89
snR40snR40 RSM10Q03201 203 aa-2.99□□□□□ -2.89
snR40snR40 PRP42Q03776 544 aaKnown RBP-2.99□□□□□ -2.89
snR40snR40 SHS1Q07657 551 aa-2.99□□□□□ -2.89
snR40snR40 COS7Q07788 383 aa-2.99□□□□□ -2.89
snR40snR40 YPL278CQ08990 100 aa-2.99□□□□□ -2.89
snR40snR40 HUA2Q12134 243 aa-2.99□□□□□ -2.89
snR40snR40 GCG1P32656 232 aaKnown RBP-3□□□□□ -2.89
snR40snR40 VAM7P32912 316 aa-3□□□□□ -2.89
snR40snR40 JEN1P36035 616 aa-3□□□□□ -2.89
snR40snR40 FPR3P38911 411 aaKnown RBP-3□□□□□ -2.89
snR40snR40 STN1P38960 494 aa-3□□□□□ -2.89
snR40snR40 YMR141CP40211 102 aa-3□□□□□ -2.89
snR40snR40 YJL055WP47044 245 aa-3□□□□□ -2.89
snR40snR40 TMA23Q03525 211 aa-3□□□□□ -2.89
snR40snR40 RRP45Q05636 305 aaKnown RBP-3□□□□□ -2.89
snR40snR40 MRPS5P33759 307 aa-3.01□□□□□ -2.89
snR40snR40 KTI12P34253 313 aaKnown RBP-3.01□□□□□ -2.89
snR40snR40 MRPL3P36516 390 aa-3.01□□□□□ -2.89
snR40snR40 OCA2P53949 197 aa-3.01□□□□□ -2.89
snR40snR40 YMR252CQ04814 134 aa-3.01□□□□□ -2.89
snR40snR40 YLR156WP0CE96 114 aa-3.02□□□□□ -2.89
snR40snR40 YLR159WP0CE97 114 aa-3.02□□□□□ -2.89
snR40snR40 YLR161WP0CE98 114 aa-3.02□□□□□ -2.89
snR40snR40 IMP1P28627 190 aa-3.02□□□□□ -2.89
snR40snR40 GPX1P36014 167 aa-3.02□□□□□ -2.89
snR40snR40 SSH1P38353 490 aaKnown RBP-3.02□□□□□ -2.89
snR40snR40 GAA1P39012 614 aa-3.02□□□□□ -2.89
snR40snR40 KAP123P40069 1113 aaKnown RBP-3.02□□□□□ -2.89
snR40snR40 OST2P46964 130 aa-3.02□□□□□ -2.89
snR40snR40 MDM34P53083 459 aa-3.02□□□□□ -2.89
snR40snR40 YDR391CQ04170 232 aa-3.02□□□□□ -2.89
snR40snR40 NEJ1Q06148 342 aa-3.02□□□□□ -2.89
snR40snR40 SMT3Q12306 101 aaKnown RBP-3.02□□□□□ -2.89
snR40snR40 COA3Q3E7B2 85 aa-3.02□□□□□ -2.89
snR40snR40 ILV1P00927 576 aaKnown RBP-3.03□□□□□ -2.89
snR40snR40 RAD1P06777 1100 aa-3.03□□□□□ -2.89
snR40snR40 YOL013W-AP0C272 63 aaPredicted RBP-3.03□□□□□ -2.89
snR40snR40 EBP2P36049 427 aaKnown RBP-3.03□□□□□ -2.89
snR40snR40 VPS45P38932 577 aa-3.03□□□□□ -2.89
snR40snR40 YFL051CP43552 160 aa-3.03□□□□□ -2.89
snR40snR40 MRX6P48564 524 aa-3.03□□□□□ -2.89
snR40snR40 NIF3P53081 288 aa-3.03□□□□□ -2.89
snR40snR40 MNT4P53745 580 aa-3.03□□□□□ -2.89
snR40snR40 ASI3P53983 676 aa-3.03□□□□□ -2.89
snR40snR40 ABP140Q08641 628 aaKnown RBP-3.03□□□□□ -2.89
snR40snR40 MED2Q12124 431 aa-3.03□□□□□ -2.89
snR40snR40 PRM4Q12498 284 aa-3.03□□□□□ -2.89
snR40snR40 SMC6Q12749 1114 aa-3.03□□□□□ -2.89
snR40snR40 YFR032C-BQ8TGU2 87 aa-3.03□□□□□ -2.89
snR40snR40 UTR1P21373 530 aa-3.04□□□□□ -2.9
snR40snR40 PEX3P28795 441 aa-3.04□□□□□ -2.9
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms