RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 POX1P13711 748 aa-1.42□□□□□ -2.64
snR38snR38 DPB2P24482 689 aaPredicted RBP-1.42□□□□□ -2.64
snR38snR38 FAA1P30624 700 aaKnown RBP-1.42□□□□□ -2.64
snR38snR38 OAC1P32332 324 aa-1.42□□□□□ -2.64
snR38snR38 NOP16P40007 231 aaKnown RBP-1.42□□□□□ -2.64
snR38snR38 ARF3P40994 183 aaRIP-Chip data-1.42□□□□□ -2.64not detected
snR38snR38 JHD2P47156 728 aaPredicted RBP-1.42□□□□□ -2.64
snR38snR38 DIG2Q03373 323 aaKnown RBP-1.42□□□□□ -2.64
snR38snR38 YLR030WQ07967 263 aa-1.42□□□□□ -2.64
snR38snR38 ARO3P14843 370 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 UTR1P21373 530 aa-1.43□□□□□ -2.64
snR38snR38 REC107P21651 314 aa-1.43□□□□□ -2.64
snR38snR38 MCM10P32354 571 aa-1.43□□□□□ -2.64
snR38snR38 MDL1P33310 695 aa-1.43□□□□□ -2.64
snR38snR38 FUI1P38196 639 aa-1.43□□□□□ -2.64
snR38snR38 PHO89P38361 574 aa-1.43□□□□□ -2.64
snR38snR38 LYS12P40495 371 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 RPS29BP41058 56 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 SUB1P54000 292 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 VPS20Q04272 221 aa-1.43□□□□□ -2.64
snR38snR38 IMH1Q06704 911 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 NOP6Q07623 225 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 SMT3Q12306 101 aaKnown RBP-1.43□□□□□ -2.64
snR38snR38 GRX6Q12438 231 aa-1.43□□□□□ -2.64
snR38snR38 UIP5P36137 443 aa-1.44□□□□□ -2.64
snR38snR38 KAP104P38217 918 aaKnown RBP-1.44□□□□□ -2.64
snR38snR38 CAJ1P39101 391 aa-1.44□□□□□ -2.64
snR38snR38 NOC2P39744 710 aaKnown RBP-1.44□□□□□ -2.64
snR38snR38 VID27P40157 782 aa-1.44□□□□□ -2.64
snR38snR38 YFL065CP43539 102 aa-1.44□□□□□ -2.64
snR38snR38 YNL247WP53852 767 aaKnown RBP-1.44□□□□□ -2.64
snR38snR38 MRPL19P53875 158 aa-1.44□□□□□ -2.64
snR38snR38 YDL180WQ12301 547 aa-1.44□□□□□ -2.64
snR38snR38 BLM10P43583 2143 aa-1.45□□□□□ -2.64
snR38snR38 PDE2P06776 526 aa-1.45□□□□□ -2.64
snR38snR38 RED1P14291 827 aa-1.45□□□□□ -2.64
snR38snR38 ARF2P19146 181 aaKnown RBP-1.45□□□□□ -2.64
snR38snR38 IFM1P25038 676 aa-1.45□□□□□ -2.64
snR38snR38 RNP1P32385 249 aa-1.45□□□□□ -2.64
snR38snR38 YPC1P38298 316 aa-1.45□□□□□ -2.64
snR38snR38 YHI9P38765 294 aa-1.45□□□□□ -2.64
snR38snR38 MGA1P53050 456 aa-1.45□□□□□ -2.64
snR38snR38 RCE1Q03530 315 aa-1.45□□□□□ -2.64
snR38snR38 CSM3Q04659 317 aa-1.45□□□□□ -2.64
snR38snR38 TAZ1Q06510 381 aa-1.45□□□□□ -2.64
snR38snR38 ARG3P05150 338 aa-1.46□□□□□ -2.64
snR38snR38 MNE1P24720 663 aa-1.46□□□□□ -2.64
snR38snR38 ERG9P29704 444 aa-1.46□□□□□ -2.64
snR38snR38 ERG2P32352 222 aa-1.46□□□□□ -2.64
snR38snR38 GDH2P33327 1092 aaKnown RBP-1.46□□□□□ -2.64
snR38snR38 PEX17P40155 199 aa-1.46□□□□□ -2.64
snR38snR38 PGD1P40356 397 aa-1.46□□□□□ -2.64
snR38snR38 YGR026WP53217 278 aa-1.46□□□□□ -2.64
snR38snR38 MRS2Q01926 470 aa-1.46□□□□□ -2.64
snR38snR38 GEP5Q12393 293 aa-1.46□□□□□ -2.64
snR38snR38 YBL112CQ3E7Y4 105 aa-1.46□□□□□ -2.64
snR38snR38 LAG2Q92325 660 aa-1.46□□□□□ -2.64
snR38snR38 HFA1P32874 2273 aa-1.46□□□□□ -2.64
snR38snR38 ERD1P16151 362 aa-1.47□□□□□ -2.64
snR38snR38 GPX1P36014 167 aa-1.47□□□□□ -2.64
snR38snR38 TEM1P38987 245 aa-1.47□□□□□ -2.64
snR38snR38 RCY1P39531 840 aa-1.47□□□□□ -2.64
snR38snR38 OST2P46964 130 aa-1.47□□□□□ -2.64
snR38snR38 NIF3P53081 288 aa-1.47□□□□□ -2.64
snR38snR38 YMR279CQ03263 540 aa-1.47□□□□□ -2.64
snR38snR38 RDL2Q08742 149 aaKnown RBP-1.47□□□□□ -2.64
snR38snR38 MSS116P15424 664 aaKnown RBP-1.48□□□□□ -2.65
snR38snR38 SAS3P34218 831 aa-1.48□□□□□ -2.65
snR38snR38 SRY1P36007 326 aa-1.48□□□□□ -2.65
snR38snR38 SLM4P38247 162 aa-1.48□□□□□ -2.65
snR38snR38 GDS1P41913 522 aa-1.48□□□□□ -2.65
snR38snR38 ARO8P53090 500 aaKnown RBP-1.48□□□□□ -2.65
snR38snR38 TOS8P53147 276 aa-1.48□□□□□ -2.65
snR38snR38 CTF19Q02732 369 aa-1.48□□□□□ -2.65
snR38snR38 YPL039WQ03080 316 aa-1.48□□□□□ -2.65
snR38snR38 ANT1Q06497 328 aa-1.48□□□□□ -2.65
snR38snR38 PST1Q12355 444 aa-1.48□□□□□ -2.65
snR38snR38 SFG1Q12507 346 aa-1.48□□□□□ -2.65
snR38snR38 CDC36P06100 191 aaPredicted RBP-1.49□□□□□ -2.65
snR38snR38 RAD1P06777 1100 aa-1.49□□□□□ -2.65
snR38snR38 SPS100P13130 326 aa-1.49□□□□□ -2.65
snR38snR38 PET9P18239 318 aaKnown RBP-1.49□□□□□ -2.65
snR38snR38 RPC53P25441 422 aa-1.49□□□□□ -2.65
snR38snR38 PSO2P30620 661 aa-1.49□□□□□ -2.65
snR38snR38 MEI5P32489 222 aa-1.49□□□□□ -2.65
snR38snR38 SIP3P38717 1229 aa-1.49□□□□□ -2.65
snR38snR38 YHL042WP38729 150 aa-1.49□□□□□ -2.65
snR38snR38 YAE1P47118 141 aaPredicted RBP-1.49□□□□□ -2.65
snR38snR38 RET3P53600 189 aa-1.49□□□□□ -2.65
snR38snR38 YNL143CP53908 130 aa-1.49□□□□□ -2.65
snR38snR38 ARX1Q03862 593 aaKnown RBP-1.49□□□□□ -2.65
snR38snR38 YHR032W-AP0C5N6 59 aa-1.5□□□□□ -2.65
snR38snR38 CPR2P23285 205 aa-1.5□□□□□ -2.65
snR38snR38 YCR025CP25352 136 aa-1.5□□□□□ -2.65
snR38snR38 MAL32P38158 584 aa-1.5□□□□□ -2.65
snR38snR38 SPP381P38282 291 aaPredicted RBP-1.5□□□□□ -2.65
snR38snR38 ATG7P38862 630 aa-1.5□□□□□ -2.65
snR38snR38 FAD1P38913 306 aa-1.5□□□□□ -2.65
snR38snR38 ARC15P40518 154 aaRIP-Chip data-1.5□□□□□ -2.65not detected
snR38snR38 YJR111CP47148 283 aaKnown RBP-1.5□□□□□ -2.65
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms