RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W NDD1Q08887 554 aa1.74□□□□□ -2.13
HER1YOR227W TMS1Q12116 473 aa1.74□□□□□ -2.13
HER1YOR227W PER33Q12144 273 aa1.74□□□□□ -2.13
HER1YOR227W YRA1Q12159 226 aaKnown RBP1.74□□□□□ -2.13
HER1YOR227W YLR111WQ12528 110 aa1.74□□□□□ -2.13
HER1YOR227W PAB1P04147 577 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
HER1YOR227W RPP2AP05319 106 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W MRP2P10663 115 aaPredicted RBP1.73□□□□□ -2.13
HER1YOR227W ARF1P11076 181 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W SNF6P18888 332 aa1.73□□□□□ -2.13
HER1YOR227W ARF2P19146 181 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W POP5P28005 173 aa1.73□□□□□ -2.13
HER1YOR227W LIP5P32875 414 aa1.73□□□□□ -2.13
HER1YOR227W SRY1P36007 326 aa1.73□□□□□ -2.13
HER1YOR227W SPC34P36131 295 aa1.73□□□□□ -2.13
HER1YOR227W MET30P39014 640 aa1.73□□□□□ -2.13
HER1YOR227W GAT1P43574 510 aa1.73□□□□□ -2.13
HER1YOR227W ASG7P46993 209 aa1.73□□□□□ -2.13
HER1YOR227W ALG13P53178 202 aa1.73□□□□□ -2.13
HER1YOR227W MAL13P53338 473 aa1.73□□□□□ -2.13
HER1YOR227W SNO2P53823 222 aa1.73□□□□□ -2.13
HER1YOR227W SWS2P53937 143 aa1.73□□□□□ -2.13
HER1YOR227W GFD1Q04839 188 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W YMR226CQ05016 267 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W GPM2Q12008 311 aa1.73□□□□□ -2.13
HER1YOR227W USB1Q12208 290 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W RRI1Q12468 440 aa1.73□□□□□ -2.13
HER1YOR227W HIS4P00815 799 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W ALG7P07286 448 aa1.73□□□□□ -2.13
HER1YOR227W RPL27AP0C2H6 136 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W RPL27BP0C2H7 136 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W STF2P16965 84 aa1.73□□□□□ -2.13
HER1YOR227W YCR022CP25620 114 aa1.73□□□□□ -2.13
HER1YOR227W CPR3P25719 182 aa1.73□□□□□ -2.13
HER1YOR227W THI80P35202 319 aa1.73□□□□□ -2.13
HER1YOR227W SUR2P38992 349 aa1.73□□□□□ -2.13
HER1YOR227W RPH1P39956 796 aa1.73□□□□□ -2.13
HER1YOR227W DDI1P40087 428 aa1.73□□□□□ -2.13
HER1YOR227W COG3P40094 801 aa1.73□□□□□ -2.13
HER1YOR227W BMT5P40493 336 aa1.73□□□□□ -2.13
HER1YOR227W PSA1P41940 361 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W KEG1P43614 200 aa1.73□□□□□ -2.13
HER1YOR227W YJR056CP47115 236 aa1.73□□□□□ -2.13
HER1YOR227W MNN10P50108 393 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W YPL199CQ08954 240 aa1.73□□□□□ -2.13
HER1YOR227W SET6Q12529 373 aa1.73□□□□□ -2.13
HER1YOR227W SEN1Q00416 2231 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W RPS13P05756 151 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W NUP2P32499 720 aa1.73□□□□□ -2.13
HER1YOR227W MUD1P32605 298 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W KAE1P36132 386 aa1.73□□□□□ -2.13
HER1YOR227W SER33P40510 469 aa1.73□□□□□ -2.13
HER1YOR227W POP1P41812 875 aa1.73□□□□□ -2.13
HER1YOR227W CPR7P47103 393 aa1.73□□□□□ -2.13
HER1YOR227W YIP1P53039 248 aa1.73□□□□□ -2.13
HER1YOR227W PEX31P53203 462 aa1.73□□□□□ -2.13
HER1YOR227W FRE4P53746 719 aa1.73□□□□□ -2.13
HER1YOR227W YNR066CP53752 436 aa1.73□□□□□ -2.13
HER1YOR227W RPL22BP56628 122 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W APM1Q00776 475 aaPredicted RBP1.73□□□□□ -2.13
HER1YOR227W SNO1Q03144 224 aa1.73□□□□□ -2.13
HER1YOR227W EBS1Q03466 884 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W TMA10Q06177 86 aa1.73□□□□□ -2.13
HER1YOR227W SEC10Q06245 871 aa1.73□□□□□ -2.13
HER1YOR227W CDA2Q06703 312 aa1.73□□□□□ -2.13
HER1YOR227W SHS1Q07657 551 aa1.73□□□□□ -2.13
HER1YOR227W YLR012CQ07927 99 aa1.73□□□□□ -2.13
HER1YOR227W SAM4Q08985 325 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W SLF1Q12034 447 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W YLL056CQ12177 298 aa1.73□□□□□ -2.13
HER1YOR227W YGK3Q12222 375 aaPredicted RBP1.73□□□□□ -2.13
HER1YOR227W MEX67Q99257 599 aaKnown RBP1.73□□□□□ -2.13
HER1YOR227W RPL4AP10664 362 aaKnown RBP1.72□□□□□ -2.13
HER1YOR227W YCR007CP25354 239 aa1.72□□□□□ -2.13
HER1YOR227W MRPL9P31334 269 aa1.72□□□□□ -2.13
HER1YOR227W YMC1P32331 307 aa1.72□□□□□ -2.13
HER1YOR227W QRI5P32344 111 aa1.72□□□□□ -2.13
HER1YOR227W APE2P32454 952 aaKnown RBP1.72□□□□□ -2.13
HER1YOR227W ATO2P32907 282 aa1.72□□□□□ -2.13
HER1YOR227W MCH2P36032 473 aa1.72□□□□□ -2.13
HER1YOR227W ROT2P38138 954 aa1.72□□□□□ -2.13
HER1YOR227W ECM8P38246 354 aa1.72□□□□□ -2.13
HER1YOR227W LAG1P38703 411 aa1.72□□□□□ -2.13
HER1YOR227W ARN1P38731 627 aa1.72□□□□□ -2.13
HER1YOR227W TDA11P38854 504 aa1.72□□□□□ -2.13
HER1YOR227W VPS25P47142 202 aa1.72□□□□□ -2.13
HER1YOR227W HMS2P47175 358 aa1.72□□□□□ -2.13
HER1YOR227W RPL4BP49626 362 aaKnown RBP1.72□□□□□ -2.13
HER1YOR227W LSG1P53145 640 aaKnown RBP1.72□□□□□ -2.13
HER1YOR227W MST27P53176 234 aa1.72□□□□□ -2.13
HER1YOR227W YNR048WP53740 393 aa1.72□□□□□ -2.13
HER1YOR227W ATG17Q06410 417 aa1.72□□□□□ -2.13
HER1YOR227W PLB3Q08108 686 aa1.72□□□□□ -2.13
HER1YOR227W THI20Q08224 551 aa1.72□□□□□ -2.13
HER1YOR227W MED7Q08278 222 aa1.72□□□□□ -2.13
HER1YOR227W SGT1Q08446 395 aa1.72□□□□□ -2.13
HER1YOR227W YIL046W-AQ3E7Z4 54 aa1.72□□□□□ -2.13
HER1YOR227W MEC1P38111 2368 aa1.72□□□□□ -2.13
HER1YOR227W YHR139C-AO13536 103 aa1.72□□□□□ -2.13
HER1YOR227W REP1P03871 373 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms