RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C BMT2P38278 337 aa3.6□□□□□ -1.83
VPS21YOR089C KRE9P39005 276 aa3.6□□□□□ -1.83
VPS21YOR089C OXA1P39952 402 aa3.6□□□□□ -1.83
VPS21YOR089C AIM10P39965 576 aaKnown RBP3.6□□□□□ -1.83
VPS21YOR089C IMP4P53941 290 aaKnown RBP3.6□□□□□ -1.83
VPS21YOR089C PRP38Q00723 242 aaPredicted RBP3.6□□□□□ -1.83
VPS21YOR089C MFG1Q07684 458 aa3.6□□□□□ -1.83
VPS21YOR089C RPN8Q08723 338 aaKnown RBP3.6□□□□□ -1.83
VPS21YOR089C TFC7Q12415 435 aa3.6□□□□□ -1.83
VPS21YOR089C YMR230W-AQ3E7B5 62 aa3.6□□□□□ -1.83
VPS21YOR089C MYO1P08964 1928 aa3.6□□□□□ -1.83
VPS21YOR089C MRP1P10662 321 aaKnown RBP3.59□□□□□ -1.83
VPS21YOR089C NTG1P31378 399 aa3.59□□□□□ -1.83
VPS21YOR089C PDC2P32896 925 aa3.59□□□□□ -1.83
VPS21YOR089C TAE1P38340 232 aa3.59□□□□□ -1.83
VPS21YOR089C SOP4P39543 234 aaPredicted RBP3.59□□□□□ -1.83
VPS21YOR089C FMC1P40491 155 aa3.59□□□□□ -1.83
VPS21YOR089C YPI1P43587 155 aa3.59□□□□□ -1.83
VPS21YOR089C YET2Q04210 160 aa3.59□□□□□ -1.83
VPS21YOR089C YHC1Q05900 231 aaKnown RBP3.59□□□□□ -1.83
VPS21YOR089C ARV1Q06541 321 aa3.59□□□□□ -1.83
VPS21YOR089C RSA1Q08932 381 aa3.59□□□□□ -1.83
VPS21YOR089C POM33Q12164 279 aa3.59□□□□□ -1.83
VPS21YOR089C YPR064WQ12492 139 aa3.59□□□□□ -1.83
VPS21YOR089C PHO2P07269 559 aa3.58□□□□□ -1.84
VPS21YOR089C MSF1P08425 469 aa3.58□□□□□ -1.84
VPS21YOR089C MET16P18408 261 aaPredicted RBP3.58□□□□□ -1.84
VPS21YOR089C DAL82P21705 255 aa3.58□□□□□ -1.84
VPS21YOR089C CDC50P25656 391 aa3.58□□□□□ -1.84
VPS21YOR089C EFM1P38732 585 aa3.58□□□□□ -1.84
VPS21YOR089C TCD1P38756 429 aa3.58□□□□□ -1.84
VPS21YOR089C BFR1P38934 470 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
VPS21YOR089C CPD1P53314 239 aa3.58□□□□□ -1.84
VPS21YOR089C RTC4P53850 401 aa3.58□□□□□ -1.84
VPS21YOR089C VAC7P53950 1165 aa3.58□□□□□ -1.84
VPS21YOR089C TRM44Q02648 567 aaKnown RBP3.58□□□□□ -1.84
VPS21YOR089C SRL4Q03085 281 aa3.58□□□□□ -1.84
VPS21YOR089C ADH6Q04894 360 aaKnown RBP3.58□□□□□ -1.84
VPS21YOR089C BOP2Q06150 570 aa3.58□□□□□ -1.84
VPS21YOR089C SUE1Q06524 206 aa3.58□□□□□ -1.84
VPS21YOR089C TAF10Q12030 206 aa3.58□□□□□ -1.84
VPS21YOR089C YPL245WQ12179 454 aaKnown RBP3.58□□□□□ -1.84
VPS21YOR089C RBD2Q12270 262 aa3.58□□□□□ -1.84
VPS21YOR089C TDH3P00359 332 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
VPS21YOR089C COX2P00410 251 aa3.57□□□□□ -1.84
VPS21YOR089C RAD3P06839 778 aa3.57□□□□□ -1.84
VPS21YOR089C PHO13P19881 312 aa3.57□□□□□ -1.84
VPS21YOR089C PMT2P31382 759 aa3.57□□□□□ -1.84
VPS21YOR089C RPT5P33297 434 aaKnown RBP3.57□□□□□ -1.84
VPS21YOR089C YBR241CP38142 488 aa3.57□□□□□ -1.84
VPS21YOR089C RFS1P38234 210 aaKnown RBP3.57□□□□□ -1.84
VPS21YOR089C HSM3P38348 480 aa3.57□□□□□ -1.84
VPS21YOR089C PEX22P39718 180 aa3.57□□□□□ -1.84
VPS21YOR089C SHQ1P40486 507 aaPredicted RBP3.57□□□□□ -1.84
VPS21YOR089C BNA6P43619 295 aa3.57□□□□□ -1.84
VPS21YOR089C YAR1P46683 200 aa3.57□□□□□ -1.84
VPS21YOR089C TAD2P47058 250 aa3.57□□□□□ -1.84
VPS21YOR089C UBC13P52490 153 aa3.57□□□□□ -1.84
VPS21YOR089C NRM1P53718 249 aa3.57□□□□□ -1.84
VPS21YOR089C MRPL50P53724 139 aa3.57□□□□□ -1.84
VPS21YOR089C RNH201P53942 307 aa3.57□□□□□ -1.84
VPS21YOR089C ALG11P53954 548 aaKnown RBP3.57□□□□□ -1.84
VPS21YOR089C PET117Q02771 107 aa3.57□□□□□ -1.84
VPS21YOR089C COX20Q04935 205 aa3.57□□□□□ -1.84
VPS21YOR089C FAR10Q06001 478 aa3.57□□□□□ -1.84
VPS21YOR089C RRG7Q08774 242 aaPredicted RBP3.57□□□□□ -1.84
VPS21YOR089C WTM1Q12363 437 aaKnown RBP3.57□□□□□ -1.84
VPS21YOR089C HIS1P00498 297 aaKnown RBP3.56□□□□□ -1.84
VPS21YOR089C CKA2P19454 339 aa3.56□□□□□ -1.84
VPS21YOR089C ZRC1P20107 442 aa3.56□□□□□ -1.84
VPS21YOR089C ISY1P21374 235 aaPredicted RBP3.56□□□□□ -1.84
VPS21YOR089C SRB4P32569 687 aa3.56□□□□□ -1.84
VPS21YOR089C CSE1P33307 960 aa3.56□□□□□ -1.84
VPS21YOR089C YET1P35723 206 aa3.56□□□□□ -1.84
VPS21YOR089C OM14P38325 134 aa3.56□□□□□ -1.84
VPS21YOR089C GAA1P39012 614 aa3.56□□□□□ -1.84
VPS21YOR089C PRM9P39551 298 aa3.56□□□□□ -1.84
VPS21YOR089C MIG3P39943 394 aa3.56□□□□□ -1.84
VPS21YOR089C UTP18P40362 594 aaPredicted RBP3.56□□□□□ -1.84
VPS21YOR089C GCN20P43535 752 aaKnown RBP3.56□□□□□ -1.84
VPS21YOR089C HIT1P46973 164 aa3.56□□□□□ -1.84
VPS21YOR089C YNL134CP53912 376 aaKnown RBP3.56□□□□□ -1.84
VPS21YOR089C YMR209CQ03648 457 aa3.56□□□□□ -1.84
VPS21YOR089C SMD2Q06217 110 aaKnown RBP3.56□□□□□ -1.84
VPS21YOR089C YLR177WQ06251 628 aa3.56□□□□□ -1.84
VPS21YOR089C CTS2Q06350 511 aa3.56□□□□□ -1.84
VPS21YOR089C RLP24Q07915 199 aaKnown RBP3.56□□□□□ -1.84
VPS21YOR089C TY3A-GQ12173 290 aa3.56□□□□□ -1.84
VPS21YOR089C TY3A-IQ99219 290 aa3.56□□□□□ -1.84
VPS21YOR089C SAL1D6W196 494 aa3.55□□□□□ -1.84
VPS21YOR089C TFS1P14306 219 aa3.55□□□□□ -1.84
VPS21YOR089C POL30P15873 258 aaKnown RBP3.55□□□□□ -1.84
VPS21YOR089C RRT12P25381 491 aa3.55□□□□□ -1.84
VPS21YOR089C ZIP1P31111 875 aa3.55□□□□□ -1.84
VPS21YOR089C WSC4P38739 605 aa3.55□□□□□ -1.84
VPS21YOR089C YHR045WP38775 560 aa3.55□□□□□ -1.84
VPS21YOR089C SLM1P40485 686 aa3.55□□□□□ -1.84
VPS21YOR089C GAB1P41733 394 aa3.55□□□□□ -1.84
VPS21YOR089C YJL118WP47022 219 aa3.55□□□□□ -1.84
VPS21YOR089C CDH1P53197 566 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms