RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C VPS15P22219 1454 aa2.88□□□□□ -1.95
HRD1YOL013C GLN3P18494 730 aa2.87□□□□□ -1.95
HRD1YOL013C RNA15P25299 296 aaPredicted RBP2.87□□□□□ -1.95
HRD1YOL013C RPL16BP26785 198 aaKnown RBP2.87□□□□□ -1.95
HRD1YOL013C AGA1P32323 725 aa2.87□□□□□ -1.95
HRD1YOL013C RAD5P32849 1169 aaPredicted RBP2.87□□□□□ -1.95
HRD1YOL013C SPT4P32914 102 aaPredicted RBP2.87□□□□□ -1.95
HRD1YOL013C AST1P35183 429 aa2.87□□□□□ -1.95
HRD1YOL013C YBR096WP38256 230 aa2.87□□□□□ -1.95
HRD1YOL013C JLP2P40206 208 aa2.87□□□□□ -1.95
HRD1YOL013C DFG10P40526 253 aa2.87□□□□□ -1.95
HRD1YOL013C YIL001WP40560 513 aa2.87□□□□□ -1.95
HRD1YOL013C UBC13P52490 153 aa2.87□□□□□ -1.95
HRD1YOL013C ALG13P53178 202 aa2.87□□□□□ -1.95
HRD1YOL013C VHT1P53241 593 aa2.87□□□□□ -1.95
HRD1YOL013C YGR067CP53243 804 aa2.87□□□□□ -1.95
HRD1YOL013C MAL13P53338 473 aa2.87□□□□□ -1.95
HRD1YOL013C YNL181WP53878 407 aa2.87□□□□□ -1.95
HRD1YOL013C PIR3Q03180 325 aa2.87□□□□□ -1.95
HRD1YOL013C CTR3Q06686 241 aa2.87□□□□□ -1.95
HRD1YOL013C CSM4Q08955 156 aa2.87□□□□□ -1.95
HRD1YOL013C GPM2Q12008 311 aa2.87□□□□□ -1.95
HRD1YOL013C IZH4Q99393 312 aa2.87□□□□□ -1.95
HRD1YOL013C GEA2P39993 1459 aaKnown RBP2.87□□□□□ -1.95
HRD1YOL013C BNI1P41832 1953 aa2.86□□□□□ -1.95
HRD1YOL013C CHC1P22137 1653 aaKnown RBP2.86□□□□□ -1.95
HRD1YOL013C TFS1P14306 219 aa2.86□□□□□ -1.95
HRD1YOL013C YAK1P14680 807 aa2.86□□□□□ -1.95
HRD1YOL013C SNF6P18888 332 aa2.86□□□□□ -1.95
HRD1YOL013C CHA1P25379 360 aaKnown RBP2.86□□□□□ -1.95
HRD1YOL013C IDH1P28834 360 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
HRD1YOL013C NDC1P32500 655 aa2.86□□□□□ -1.95
HRD1YOL013C MCH2P36032 473 aa2.86□□□□□ -1.95
HRD1YOL013C MAK5P38112 773 aaPredicted RBP2.86□□□□□ -1.95
HRD1YOL013C SDS24P38314 527 aa2.86□□□□□ -1.95
HRD1YOL013C YIA6P40556 373 aa2.86□□□□□ -1.95
HRD1YOL013C OST1P41543 476 aaKnown RBP2.86□□□□□ -1.95
HRD1YOL013C ASG7P46993 209 aa2.86□□□□□ -1.95
HRD1YOL013C YJR012CP47087 207 aa2.86□□□□□ -1.95
HRD1YOL013C ADO1P47143 340 aaKnown RBP2.86□□□□□ -1.95
HRD1YOL013C MGA1P53050 456 aa2.86□□□□□ -1.95
HRD1YOL013C YGL260WP53056 76 aa2.86□□□□□ -1.95
HRD1YOL013C YGL159WP53110 370 aa2.86□□□□□ -1.95
HRD1YOL013C MRM2P53123 320 aa2.86□□□□□ -1.95
HRD1YOL013C YIP3P53633 176 aa2.86□□□□□ -1.95
HRD1YOL013C HCH1P53834 153 aa2.86□□□□□ -1.95
HRD1YOL013C YMR254CQ04838 102 aa2.86□□□□□ -1.95
HRD1YOL013C FMP42Q04991 504 aa2.86□□□□□ -1.95
HRD1YOL013C SFH1Q06168 426 aa2.86□□□□□ -1.95
HRD1YOL013C RDL2Q08742 149 aaKnown RBP2.86□□□□□ -1.95
HRD1YOL013C MUM3Q08750 479 aa2.86□□□□□ -1.95
HRD1YOL013C FRE8Q12209 686 aa2.86□□□□□ -1.95
HRD1YOL013C UTP23Q12339 254 aaKnown RBP2.86□□□□□ -1.95
HRD1YOL013C RPL20AP0CX23 172 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C RPL20BP0CX24 172 aaPredicted RBP2.85□□□□□ -1.95
HRD1YOL013C HOM6P31116 359 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C ATS1P31386 333 aa2.85□□□□□ -1.95
HRD1YOL013C MUD1P32605 298 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C UBC6P33296 250 aaPredicted RBP2.85□□□□□ -1.95
HRD1YOL013C RIB5P38145 238 aa2.85□□□□□ -1.95
HRD1YOL013C YBR062CP38239 180 aa2.85□□□□□ -1.95
HRD1YOL013C YER121WP40076 114 aa2.85□□□□□ -1.95
HRD1YOL013C YFR057WP43625 151 aa2.85□□□□□ -1.95
HRD1YOL013C CIN2P46670 268 aa2.85□□□□□ -1.95
HRD1YOL013C IBA57P47158 497 aa2.85□□□□□ -1.95
HRD1YOL013C YPT32P51996 222 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C GET1P53192 235 aa2.85□□□□□ -1.95
HRD1YOL013C TRM82Q03774 444 aa2.85□□□□□ -1.95
HRD1YOL013C YPL199CQ08954 240 aa2.85□□□□□ -1.95
HRD1YOL013C TUS1Q06412 1307 aa2.85□□□□□ -1.95
HRD1YOL013C FBA1P14540 359 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C NAM9P27929 486 aa2.85□□□□□ -1.95
HRD1YOL013C PRX1P34227 261 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C AVT5P38176 459 aa2.85□□□□□ -1.95
HRD1YOL013C ECM8P38246 354 aa2.85□□□□□ -1.95
HRD1YOL013C IKI1P38874 309 aa2.85□□□□□ -1.95
HRD1YOL013C PET8P38921 284 aa2.85□□□□□ -1.95
HRD1YOL013C SOP4P39543 234 aaPredicted RBP2.85□□□□□ -1.95
HRD1YOL013C MTW1P39731 289 aa2.85□□□□□ -1.95
HRD1YOL013C YND1P40009 630 aa2.85□□□□□ -1.95
HRD1YOL013C HEM14P40012 539 aa2.85□□□□□ -1.95
HRD1YOL013C ALG8P40351 577 aa2.85□□□□□ -1.95
HRD1YOL013C YPS5P53057 165 aa2.85□□□□□ -1.95
HRD1YOL013C SWC4P53201 476 aa2.85□□□□□ -1.95
HRD1YOL013C PRP38Q00723 242 aaPredicted RBP2.85□□□□□ -1.95
HRD1YOL013C PRM15Q03262 622 aa2.85□□□□□ -1.95
HRD1YOL013C TDA1Q03533 586 aa2.85□□□□□ -1.95
HRD1YOL013C YMR114CQ04471 368 aaKnown RBP2.85□□□□□ -1.95
HRD1YOL013C TAF10Q12030 206 aa2.85□□□□□ -1.95
HRD1YOL013C CSR2Q12734 1121 aa2.85□□□□□ -1.95
HRD1YOL013C SIR4P11978 1358 aa2.84□□□□□ -1.95
HRD1YOL013C YOR093CQ12275 1648 aa2.84□□□□□ -1.95
HRD1YOL013C VMR1P38735 1592 aa2.84□□□□□ -1.95
HRD1YOL013C ERD1P16151 362 aa2.84□□□□□ -1.95
HRD1YOL013C CDC10P25342 322 aaKnown RBP2.84□□□□□ -1.95
HRD1YOL013C PDC2P32896 925 aa2.84□□□□□ -1.95
HRD1YOL013C NTF2P33331 125 aaKnown RBP2.84□□□□□ -1.95
HRD1YOL013C SPO23P33757 523 aa2.84□□□□□ -1.95
HRD1YOL013C JEN1P36035 616 aa2.84□□□□□ -1.95
HRD1YOL013C COX15P40086 486 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms