RNA–Protein interactions for RNA: YNR038W

DBP6, Transcript of Essential protein involved in ribosome biogenesis, yeast

Gene DBP6, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP6	YNR038W	VAB2	P40003	282 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	AGP3	P43548	558 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	COX16	P47081	118 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	MPP10	P47083	593 aa	Known RBP	0.74	□□□□□ -2.29
DBP6	YNR038W	MND1	P53102	219 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	YNL260C	P53846	198 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	SEC13	Q04491	297 aa	Known RBP	0.74	□□□□□ -2.29
DBP6	YNR038W	YLR446W	Q06204	433 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	YLR413W	Q06689	675 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	SAM4	Q08985	325 aa	Known RBP	0.74	□□□□□ -2.29
DBP6	YNR038W	SIA1	Q12212	622 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	TFC7	Q12415	435 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	FMP16	Q12497	93 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	YAL063C-A	Q3E791	96 aa		0.74	□□□□□ -2.29
DBP6	YNR038W	RPP0	P05317	312 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	RPC40	P07703	335 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	GAL7	P08431	366 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	OM45	P16547	393 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	CDC42	P19073	191 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	ATG15	P25641	520 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	GCG1	P32656	232 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	RPC37	P36121	282 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	MBA1	P38300	278 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	RTT105	P40063	208 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	YPT32	P51996	222 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	TPN1	P53099	579 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	FMP48	P53233	369 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	YGR266W	P53326	701 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	YNL050C	P53952	270 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	EGD1	Q02642	157 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	YPL077C	Q02831	240 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	VBA1	Q04301	562 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	BCP1	Q06338	283 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	DTD1	Q07648	150 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	YOR292C	Q08743	309 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	YPL245W	Q12179	454 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	YOR114W	Q12219	294 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	UTP23	Q12339	254 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	TRM10	Q12400	293 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	LAG2	Q92325	660 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	RAD7	P06779	565 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	PET494	P07390	489 aa	Predicted RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	SSA3	P09435	649 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	ERD1	P16151	362 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	CSM1	P25651	190 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	RPL16B	P26785	198 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	VPH2	P32341	215 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	TPO5	P36029	618 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	SWD2	P36104	329 aa	Predicted RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	HIS2	P38635	335 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	IBA57	P47158	497 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	YGL118C	P53132	145 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	SWC4	P53201	476 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	KAP95	Q06142	861 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	BER1	Q06688	274 aa	Known RBP	0.73	□□□□□ -2.29
DBP6	YNR038W	ASR1	Q06834	288 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	YLL007C	Q07799	665 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	IZH4	Q99393	312 aa		0.73	□□□□□ -2.29
DBP6	YNR038W	COX2	P00410	251 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	TFS1	P14306	219 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	PRE7	P23724	241 aa	Known RBP	0.72	□□□□□ -2.29
DBP6	YNR038W	AEP1	P32493	518 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	CDC13	P32797	924 aa	Known RBP	0.72	□□□□□ -2.29
DBP6	YNR038W	SPT4	P32914	102 aa	Predicted RBP	0.72	□□□□□ -2.29
DBP6	YNR038W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
DBP6	YNR038W	YKL063C	P35725	167 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	EBP2	P36049	427 aa	Known RBP	0.72	□□□□□ -2.29
DBP6	YNR038W	PEX18	P38855	283 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	SER33	P40510	469 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	YAR1	P46683	200 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	HIT1	P46973	164 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	UFD1	P53044	361 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	SYF2	P53277	215 aa	Predicted RBP	0.72	□□□□□ -2.29
DBP6	YNR038W	SPP2	Q02521	185 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	SDC1	Q03323	175 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	DPP1	Q05521	289 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	ARV1	Q06541	321 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	RRT8	Q08219	342 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	ERP3	Q12403	225 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	YIL002W-A	Q3E7Z5	69 aa		0.72	□□□□□ -2.29
DBP6	YNR038W	RPS3	P05750	240 aa	Known RBP	0.71	□□□□□ -2.3
DBP6	YNR038W	POL30	P15873	258 aa	Known RBP	0.71	□□□□□ -2.3
DBP6	YNR038W	PHO80	P20052	293 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	EHD3	P28817	500 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	MRPL6	P32904	214 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	NRG2	P38082	220 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	RCY1	P39531	840 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	PRM9	P39551	298 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	NPT1	P39683	429 aa	Known RBP	0.71	□□□□□ -2.3
DBP6	YNR038W	COA1	P40452	197 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	LIF1	P53150	421 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	SWS2	P53937	143 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	OSH6	Q02201	448 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	YML018C	Q03730	393 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	COX20	Q04935	205 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	VIK1	Q12045	647 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	POM33	Q12164	279 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	YPR064W	Q12492	139 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	MSF1	P08425	469 aa		0.71	□□□□□ -2.3
DBP6	YNR038W	COS2	P0CX12	379 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms