RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W APM1Q00776 475 aaPredicted RBP5.42□□□□□ -1.54
CAF40YNL288W SNZ1Q03148 297 aa5.42□□□□□ -1.54
CAF40YNL288W TLG1Q03322 224 aa5.42□□□□□ -1.54
CAF40YNL288W OST6Q03723 332 aa5.42□□□□□ -1.54
CAF40YNL288W RNH1Q04740 348 aa5.42□□□□□ -1.54
CAF40YNL288W YLR345WQ06137 509 aa5.42□□□□□ -1.54
CAF40YNL288W YLR040CQ07988 224 aa5.42□□□□□ -1.54
CAF40YNL288W BAG7Q12128 409 aa5.42□□□□□ -1.54
CAF40YNL288W SIA1Q12212 622 aa5.42□□□□□ -1.54
CAF40YNL288W PST2Q12335 198 aaKnown RBP5.42□□□□□ -1.54
CAF40YNL288W MED11Q99278 115 aa5.42□□□□□ -1.54
CAF40YNL288W CDC36P06100 191 aaPredicted RBP5.41□□□□□ -1.54
CAF40YNL288W RPL43AP0CX25 92 aaKnown RBP5.41□□□□□ -1.54
CAF40YNL288W RPL43BP0CX26 92 aa5.41□□□□□ -1.54
CAF40YNL288W SEC12P11655 471 aa5.41□□□□□ -1.54
CAF40YNL288W RPD3P32561 433 aa5.41□□□□□ -1.54
CAF40YNL288W TIF3P34167 436 aaKnown RBP5.41□□□□□ -1.54
CAF40YNL288W MRPL39P36533 70 aa5.41□□□□□ -1.54
CAF40YNL288W SSZ1P38788 538 aaKnown RBP5.41□□□□□ -1.54
CAF40YNL288W QRI7P43122 407 aa5.41□□□□□ -1.54
CAF40YNL288W SSY5P47002 699 aa5.41□□□□□ -1.54
CAF40YNL288W MSY1P48527 492 aa5.41□□□□□ -1.54
CAF40YNL288W MRPL19P53875 158 aa5.41□□□□□ -1.54
CAF40YNL288W NUP116Q02630 1113 aa5.41□□□□□ -1.54
CAF40YNL288W ARP10Q04549 284 aa5.41□□□□□ -1.54
CAF40YNL288W YLR352WQ06479 807 aa5.41□□□□□ -1.54
CAF40YNL288W HRT1Q08273 121 aa5.41□□□□□ -1.54
CAF40YNL288W YOR289WQ12012 251 aaPredicted RBP5.41□□□□□ -1.54
CAF40YNL288W PRS5Q12265 496 aaKnown RBP5.41□□□□□ -1.54
CAF40YNL288W TRM10Q12400 293 aa5.41□□□□□ -1.54
CAF40YNL288W PCL9Q12477 304 aa5.41□□□□□ -1.54
CAF40YNL288W VCX1Q99385 411 aa5.41□□□□□ -1.54
CAF40YNL288W SPO7P18410 259 aa5.4□□□□□ -1.54
CAF40YNL288W STE50P25344 346 aa5.4□□□□□ -1.54
CAF40YNL288W PTC6P25646 442 aa5.4□□□□□ -1.54
CAF40YNL288W CAM1P29547 415 aaKnown RBP5.4□□□□□ -1.54
CAF40YNL288W MCM10P32354 571 aa5.4□□□□□ -1.54
CAF40YNL288W SUR1P33300 382 aa5.4□□□□□ -1.54
CAF40YNL288W COS9P36034 407 aa5.4□□□□□ -1.54
CAF40YNL288W VBA2P38358 474 aaKnown RBP5.4□□□□□ -1.54
CAF40YNL288W MDM31P38880 579 aa5.4□□□□□ -1.54
CAF40YNL288W IPT1P38954 527 aa5.4□□□□□ -1.54
CAF40YNL288W HIS6P40545 261 aa5.4□□□□□ -1.54
CAF40YNL288W HSV2P50079 448 aaPredicted RBP5.4□□□□□ -1.54
CAF40YNL288W RRN9P53437 365 aa5.4□□□□□ -1.54
CAF40YNL288W BUD17P53727 317 aa5.4□□□□□ -1.54
CAF40YNL288W MNT4P53745 580 aa5.4□□□□□ -1.54
CAF40YNL288W PGA1P53896 198 aa5.4□□□□□ -1.54
CAF40YNL288W SPO19Q03029 223 aa5.4□□□□□ -1.54
CAF40YNL288W RVB1Q03940 463 aaKnown RBP5.4□□□□□ -1.54
CAF40YNL288W YMR087WQ04299 284 aa5.4□□□□□ -1.54
CAF40YNL288W MRPL51Q06090 140 aaPredicted RBP5.4□□□□□ -1.54
CAF40YNL288W YGK3Q12222 375 aaPredicted RBP5.4□□□□□ -1.54
CAF40YNL288W YDL180WQ12301 547 aa5.4□□□□□ -1.54
CAF40YNL288W DBP10Q12389 995 aaKnown RBP5.4□□□□□ -1.54
CAF40YNL288W YGL041W-AP0C5N3 154 aa5.39□□□□□ -1.55
CAF40YNL288W MAL32P38158 584 aa5.39□□□□□ -1.55
CAF40YNL288W GOS1P38736 223 aa5.39□□□□□ -1.55
CAF40YNL288W YHR035WP38769 630 aa5.39□□□□□ -1.55
CAF40YNL288W NAS2P40555 220 aa5.39□□□□□ -1.55
CAF40YNL288W BRR6P53062 197 aa5.39□□□□□ -1.55
CAF40YNL288W MAL12P53341 584 aa5.39□□□□□ -1.55
CAF40YNL288W TMA20P89886 181 aaPredicted RBP5.39□□□□□ -1.55
CAF40YNL288W KAP120Q02932 1032 aa5.39□□□□□ -1.55
CAF40YNL288W FIN1Q03898 291 aa5.39□□□□□ -1.55
CAF40YNL288W YDL114WQ07530 308 aa5.39□□□□□ -1.55
CAF40YNL288W HMS1Q12398 434 aa5.39□□□□□ -1.55
CAF40YNL288W MET2P08465 486 aa5.38□□□□□ -1.55
CAF40YNL288W YCL002CP25565 263 aa5.38□□□□□ -1.55
CAF40YNL288W VPH2P32341 215 aa5.38□□□□□ -1.55
CAF40YNL288W KRE6P32486 720 aa5.38□□□□□ -1.55
CAF40YNL288W YME2P32843 850 aa5.38□□□□□ -1.55
CAF40YNL288W SOF1P33750 489 aaKnown RBP5.38□□□□□ -1.55
CAF40YNL288W ECM4P36156 370 aa5.38□□□□□ -1.55
CAF40YNL288W MSS4P38994 779 aa5.38□□□□□ -1.55
CAF40YNL288W PHO90P39535 881 aa5.38□□□□□ -1.55
CAF40YNL288W BUR6P40096 142 aa5.38□□□□□ -1.55
CAF40YNL288W IRC5P43610 853 aa5.38□□□□□ -1.55
CAF40YNL288W SFH5P47008 294 aa5.38□□□□□ -1.55
CAF40YNL288W NIT3P49954 291 aa5.38□□□□□ -1.55
CAF40YNL288W BNA7Q04066 261 aa5.38□□□□□ -1.55
CAF40YNL288W YMR315WQ04869 349 aaKnown RBP5.38□□□□□ -1.55
CAF40YNL288W COQ11Q05892 277 aa5.38□□□□□ -1.55
CAF40YNL288W RRP9Q06506 573 aaKnown RBP5.38□□□□□ -1.55
CAF40YNL288W TAZ1Q06510 381 aa5.38□□□□□ -1.55
CAF40YNL288W MIM1Q08176 113 aa5.38□□□□□ -1.55
CAF40YNL288W RTC5Q12108 567 aaKnown RBP5.38□□□□□ -1.55
CAF40YNL288W ACF2Q12168 779 aa5.38□□□□□ -1.55
CAF40YNL288W YHR214C-EQ8TGK0 99 aa5.38□□□□□ -1.55
CAF40YNL288W MSW1P04803 379 aa5.37□□□□□ -1.55
CAF40YNL288W HEM4P06174 275 aa5.37□□□□□ -1.55
CAF40YNL288W PRB1P09232 635 aa5.37□□□□□ -1.55
CAF40YNL288W SSA3P09435 649 aaKnown RBP5.37□□□□□ -1.55
CAF40YNL288W NFT1P0CE68 1218 aa5.37□□□□□ -1.55
CAF40YNL288W MDH1P17505 334 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
CAF40YNL288W URE2P23202 354 aaKnown RBP5.37□□□□□ -1.55
CAF40YNL288W CNA1P23287 553 aa5.37□□□□□ -1.55
CAF40YNL288W EXG1P23776 448 aaKnown RBP5.37□□□□□ -1.55
CAF40YNL288W PPA2P28239 310 aa5.37□□□□□ -1.55
CAF40YNL288W VMA6P32366 345 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms