RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A STF1P01098 86 aa2.8□□□□□ -1.96
YSF3YNL138W-A RPL6BP05739 176 aaKnown RBP2.8□□□□□ -1.96
YSF3YNL138W-A SLM5P25345 492 aaKnown RBP2.8□□□□□ -1.96
YSF3YNL138W-A RRP7P25368 297 aaPredicted RBP2.8□□□□□ -1.96
YSF3YNL138W-A STP22P25604 385 aa2.8□□□□□ -1.96
YSF3YNL138W-A COX13P32799 129 aa2.8□□□□□ -1.96
YSF3YNL138W-A RFT1P38206 574 aaPredicted RBP2.8□□□□□ -1.96
YSF3YNL138W-A WSS1P38838 269 aa2.8□□□□□ -1.96
YSF3YNL138W-A OXA1P39952 402 aa2.8□□□□□ -1.96
YSF3YNL138W-A YIL012WP40551 113 aa2.8□□□□□ -1.96
YSF3YNL138W-A HAC1P41546 238 aa2.8□□□□□ -1.96
YSF3YNL138W-A HOC1P47124 396 aa2.8□□□□□ -1.96
YSF3YNL138W-A ALF1P53904 254 aa2.8□□□□□ -1.96
YSF3YNL138W-A PRP38Q00723 242 aaPredicted RBP2.8□□□□□ -1.96
YSF3YNL138W-A RPL6AQ02326 176 aaKnown RBP2.8□□□□□ -1.96
YSF3YNL138W-A YDR286CQ05530 114 aa2.8□□□□□ -1.96
YSF3YNL138W-A AAD15Q08361 143 aa2.8□□□□□ -1.96
YSF3YNL138W-A MMT2Q08970 484 aa2.8□□□□□ -1.96
YSF3YNL138W-A FRE6Q12473 712 aa2.8□□□□□ -1.96
YSF3YNL138W-A YCR024C-BQ3E7Z8 88 aa2.8□□□□□ -1.96
YSF3YNL138W-A PIS1P06197 220 aaKnown RBP2.79□□□□□ -1.96
YSF3YNL138W-A MEI4P29467 408 aa2.79□□□□□ -1.96
YSF3YNL138W-A SKT5P34226 696 aa2.79□□□□□ -1.96
YSF3YNL138W-A YKL187CP34231 750 aa2.79□□□□□ -1.96
YSF3YNL138W-A YKL102CP34249 101 aa2.79□□□□□ -1.96
YSF3YNL138W-A LAS1P36146 502 aaPredicted RBP2.79□□□□□ -1.96
YSF3YNL138W-A YHR127WP38833 243 aaKnown RBP2.79□□□□□ -1.96
YSF3YNL138W-A POP2P39008 433 aa2.79□□□□□ -1.96
YSF3YNL138W-A YMR144WP40214 342 aaKnown RBP2.79□□□□□ -1.96
YSF3YNL138W-A MAM33P40513 266 aa2.79□□□□□ -1.96
YSF3YNL138W-A GPI8P49018 411 aa2.79□□□□□ -1.96
YSF3YNL138W-A PDR16P53860 351 aaKnown RBP2.79□□□□□ -1.96
YSF3YNL138W-A EBS1Q03466 884 aaKnown RBP2.79□□□□□ -1.96
YSF3YNL138W-A LIP2Q06005 328 aa2.79□□□□□ -1.96
YSF3YNL138W-A MFG1Q07684 458 aa2.79□□□□□ -1.96
YSF3YNL138W-A PFK27Q12471 397 aaPredicted RBP2.79□□□□□ -1.96
YSF3YNL138W-A YOR032W-AQ8TGS1 66 aa2.79□□□□□ -1.96
YSF3YNL138W-A TPK3P05986 398 aa2.78□□□□□ -1.96
YSF3YNL138W-A RPL12AP0CX53 165 aaKnown RBP2.78□□□□□ -1.96
YSF3YNL138W-A RPL12BP0CX54 165 aa2.78□□□□□ -1.96
YSF3YNL138W-A MSS116P15424 664 aaKnown RBP2.78□□□□□ -1.96
YSF3YNL138W-A HSP26P15992 214 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YSF3YNL138W-A RPB5P20434 215 aa2.78□□□□□ -1.96
YSF3YNL138W-A ADE1P27616 306 aa2.78□□□□□ -1.96
YSF3YNL138W-A PUP2P32379 260 aa2.78□□□□□ -1.96
YSF3YNL138W-A SPT10P35208 640 aa2.78□□□□□ -1.96
YSF3YNL138W-A GPX2P38143 162 aa2.78□□□□□ -1.96
YSF3YNL138W-A GRE3P38715 327 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YSF3YNL138W-A UTP25P40498 721 aaKnown RBP2.78□□□□□ -1.96
YSF3YNL138W-A ICE2P40499 491 aa2.78□□□□□ -1.96
YSF3YNL138W-A ATG18P43601 500 aa2.78□□□□□ -1.96
YSF3YNL138W-A YNL247WP53852 767 aaKnown RBP2.78□□□□□ -1.96
YSF3YNL138W-A SKI8Q02793 397 aaPredicted RBP2.78□□□□□ -1.96
YSF3YNL138W-A YPL107WQ02873 248 aa2.78□□□□□ -1.96
YSF3YNL138W-A VPS20Q04272 221 aa2.78□□□□□ -1.96
YSF3YNL138W-A URC2Q04411 772 aa2.78□□□□□ -1.96
YSF3YNL138W-A NDL1Q06568 189 aa2.78□□□□□ -1.96
YSF3YNL138W-A ASA1Q06822 443 aa2.78□□□□□ -1.96
YSF3YNL138W-A YDR018CQ12185 396 aa2.78□□□□□ -1.96
YSF3YNL138W-A NFI1Q12216 726 aa2.78□□□□□ -1.96
YSF3YNL138W-A YOR012WQ12351 137 aa2.78□□□□□ -1.96
YSF3YNL138W-A YOP1Q12402 180 aa2.78□□□□□ -1.96
YSF3YNL138W-A Q0144Q9ZZW2 109 aa2.78□□□□□ -1.96
YSF3YNL138W-A TAH1P25638 111 aaPredicted RBP2.77□□□□□ -1.97
YSF3YNL138W-A SMI1P32566 505 aa2.77□□□□□ -1.97
YSF3YNL138W-A DOA1P36037 715 aa2.77□□□□□ -1.97
YSF3YNL138W-A ANR2P36090 516 aaPredicted RBP2.77□□□□□ -1.97
YSF3YNL138W-A DAD2P36162 133 aa2.77□□□□□ -1.97
YSF3YNL138W-A GDT1P38301 280 aaPredicted RBP2.77□□□□□ -1.97
YSF3YNL138W-A YMR262WP38430 313 aa2.77□□□□□ -1.97
YSF3YNL138W-A PAC11P40960 533 aa2.77□□□□□ -1.97
YSF3YNL138W-A SEC27P41811 889 aaKnown RBP2.77□□□□□ -1.97
YSF3YNL138W-A YIP5P53108 310 aa2.77□□□□□ -1.97
YSF3YNL138W-A CWC22P53333 577 aaKnown RBP2.77□□□□□ -1.97
YSF3YNL138W-A RRN9P53437 365 aa2.77□□□□□ -1.97
YSF3YNL138W-A ADH6Q04894 360 aaKnown RBP2.77□□□□□ -1.97
YSF3YNL138W-A YPR091CQ06833 770 aa2.77□□□□□ -1.97
YSF3YNL138W-A LOT6Q07923 191 aa2.77□□□□□ -1.97
YSF3YNL138W-A DET1Q99288 334 aaKnown RBP2.77□□□□□ -1.97
YSF3YNL138W-A RPL22AP05749 121 aaKnown RBP2.76□□□□□ -1.97
YSF3YNL138W-A PRB1P09232 635 aa2.76□□□□□ -1.97
YSF3YNL138W-A RPB9P27999 122 aa2.76□□□□□ -1.97
YSF3YNL138W-A TOA2P32774 122 aa2.76□□□□□ -1.97
YSF3YNL138W-A TIP20P33891 701 aa2.76□□□□□ -1.97
YSF3YNL138W-A ECM8P38246 354 aa2.76□□□□□ -1.97
YSF3YNL138W-A ARN2P38724 620 aa2.76□□□□□ -1.97
YSF3YNL138W-A GEP4P38812 185 aa2.76□□□□□ -1.97
YSF3YNL138W-A MLH1P38920 769 aa2.76□□□□□ -1.97
YSF3YNL138W-A SEN34P39707 275 aa2.76□□□□□ -1.97
YSF3YNL138W-A DFG10P40526 253 aa2.76□□□□□ -1.97
YSF3YNL138W-A RPL10P41805 221 aaKnown RBP2.76□□□□□ -1.97
YSF3YNL138W-A RPE1P46969 238 aa2.76□□□□□ -1.97
YSF3YNL138W-A ABM1P47146 123 aa2.76□□□□□ -1.97
YSF3YNL138W-A RAD17P48581 401 aa2.76□□□□□ -1.97
YSF3YNL138W-A CGI121Q03705 181 aaKnown RBP2.76□□□□□ -1.97
YSF3YNL138W-A API2Q04413 109 aa2.76□□□□□ -1.97
YSF3YNL138W-A PIN3Q06449 215 aa2.76□□□□□ -1.97
YSF3YNL138W-A YPR078CQ06813 372 aa2.76□□□□□ -1.97
YSF3YNL138W-A PST1Q12355 444 aa2.76□□□□□ -1.97
YSF3YNL138W-A PRP46Q12417 451 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms