RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A ZIP1P31111 875 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A SPS19P32573 292 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A ATG12P38316 186 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A YGL262WP53054 175 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A PEX31P53203 462 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A FMP48P53233 369 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A RNY1Q02933 434 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A ADH6Q04894 360 aaKnown RBP3.59□□□□□ -1.83
YNL054W-AYNL054W-A VIK1Q12045 647 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A TRM10Q12400 293 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A TFC7Q12415 435 aa3.59□□□□□ -1.83
YNL054W-AYNL054W-A HIS1P00498 297 aaKnown RBP3.58□□□□□ -1.84
YNL054W-AYNL054W-A ASP3-2P0CX77 362 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A ASP3-3P0CX78 362 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A ASP3-4P0CX79 362 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A ASP3-1P0CZ17 362 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A YCR025CP25352 136 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A ATG15P25641 520 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A VPH2P32341 215 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A CDC13P32797 924 aaKnown RBP3.58□□□□□ -1.84
YNL054W-AYNL054W-A FRM2P37261 193 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A PRS2P38620 318 aaKnown RBP3.58□□□□□ -1.84
YNL054W-AYNL054W-A DED81P38707 554 aaKnown RBP3.58□□□□□ -1.84
YNL054W-AYNL054W-A RRT13P40042 185 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A TAD2P47058 250 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A HAL1Q01766 294 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A PET117Q02771 107 aa3.58□□□□□ -1.84
YNL054W-AYNL054W-A RUD3Q12234 484 aaKnown RBP3.58□□□□□ -1.84
YNL054W-AYNL054W-A REV1P12689 985 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A EPT1P22140 391 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A SER33P40510 469 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A VEL1P53058 206 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A SWS2P53937 143 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A INP1Q03694 420 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A YMR244WQ04018 355 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A PIN3Q06449 215 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A YOL029CQ08187 201 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A SME1Q12330 94 aaPredicted RBP3.57□□□□□ -1.84
YNL054W-AYNL054W-A DFM1Q12743 341 aaKnown RBP3.57□□□□□ -1.84
YNL054W-AYNL054W-A YAL067W-AQ8TGK6 75 aa3.57□□□□□ -1.84
YNL054W-AYNL054W-A PRS1P32895 427 aaKnown RBP3.56□□□□□ -1.84
YNL054W-AYNL054W-A ZRT3P34240 503 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A UTH1P36135 365 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A MRX3P38172 270 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A YER184CP39961 794 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A YER085CP40058 173 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A NBP1P52919 319 aaPredicted RBP3.56□□□□□ -1.84
YNL054W-AYNL054W-A ACT1P60010 375 aaKnown RBP3.56□□□□□ -1.84
YNL054W-AYNL054W-A VPS60Q03390 229 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A ECM19Q06011 112 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A SEC10Q06245 871 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A MSH5Q12175 901 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A YAL063C-AQ3E791 96 aa3.56□□□□□ -1.84
YNL054W-AYNL054W-A RPS5P26783 225 aaKnown RBP3.55□□□□□ -1.84
YNL054W-AYNL054W-A DBP7P36120 742 aaKnown RBP3.55□□□□□ -1.84
YNL054W-AYNL054W-A GCN20P43535 752 aaKnown RBP3.55□□□□□ -1.84
YNL054W-AYNL054W-A YFL064CP43540 174 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A MIC19P43594 170 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A HIT1P46973 164 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A ASG7P46993 209 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A NBP35P52920 328 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A LIF1P53150 421 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A MAL13P53338 473 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A YLR283WQ05867 314 aa3.55□□□□□ -1.84
YNL054W-AYNL054W-A DIB1Q06819 143 aaPredicted RBP3.55□□□□□ -1.84
YNL054W-AYNL054W-A TIR4Q12218 487 aaPredicted RBP3.55□□□□□ -1.84
YNL054W-AYNL054W-A PSK1P31374 1356 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A YAL064W-BO13512 126 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A MRP1P10662 321 aaKnown RBP3.54□□□□□ -1.84
YNL054W-AYNL054W-A RPB9P27999 122 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A MSN4P33749 630 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A AVT7P40501 490 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A GLG2P47011 380 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A SDC1Q03323 175 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A CTR3Q06686 241 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A PAM18Q07914 168 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A YOS9Q99220 542 aa3.54□□□□□ -1.84
YNL054W-AYNL054W-A TDH2P00358 332 aaKnown RBP3.53□□□□□ -1.84
YNL054W-AYNL054W-A RPO26P20435 155 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A COX10P21592 462 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A PEX3P28795 441 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A ALK2P32789 676 aaPredicted RBP3.53□□□□□ -1.84
YNL054W-AYNL054W-A AIM29P36154 155 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A MRPL3P36516 390 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A SHC1P39000 512 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A DSN1P40568 576 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A RPL10P41805 221 aaKnown RBP3.53□□□□□ -1.84
YNL054W-AYNL054W-A YPL113CQ02961 396 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A CSM4Q08955 156 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A PER33Q12144 273 aa3.53□□□□□ -1.84
YNL054W-AYNL054W-A CFT1Q06632 1357 aaKnown RBP3.52□□□□□ -1.85
YNL054W-AYNL054W-A SOD1P00445 154 aaKnown RBP3.52□□□□□ -1.85
YNL054W-AYNL054W-A YCR016WP25617 290 aaKnown RBP3.52□□□□□ -1.85
YNL054W-AYNL054W-A EHD3P28817 500 aa3.52□□□□□ -1.85
YNL054W-AYNL054W-A QRI5P32344 111 aa3.52□□□□□ -1.85
YNL054W-AYNL054W-A ECM34P38728 170 aa3.52□□□□□ -1.85
YNL054W-AYNL054W-A BFR1P38934 470 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
YNL054W-AYNL054W-A SMB1P40018 196 aaKnown RBP3.52□□□□□ -1.85
YNL054W-AYNL054W-A YJR012CP47087 207 aa3.52□□□□□ -1.85
YNL054W-AYNL054W-A UTP15Q04305 513 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms