RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W ATP3P38077 311 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W CCZ1P38273 704 aa3.48□□□□□ -1.85
ECM16YMR128W LRP1P38801 184 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W YPT35P38815 214 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W NSG1P38837 291 aa3.48□□□□□ -1.85
ECM16YMR128W YIL161WP40449 235 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W YIL060WP40519 144 aa3.48□□□□□ -1.85
ECM16YMR128W SNM1P40993 198 aa3.48□□□□□ -1.85
ECM16YMR128W GLR1P41921 483 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W AGX1P43567 385 aa3.48□□□□□ -1.85
ECM16YMR128W RPE1P46969 238 aa3.48□□□□□ -1.85
ECM16YMR128W ERG26P53199 349 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W PAU12P53343 120 aa3.48□□□□□ -1.85
ECM16YMR128W RVB1Q03940 463 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W IPK1Q06667 281 aa3.48□□□□□ -1.85
ECM16YMR128W YOR365CQ08844 703 aa3.48□□□□□ -1.85
ECM16YMR128W SFM1Q12314 213 aa3.48□□□□□ -1.85
ECM16YMR128W PCL9Q12477 304 aa3.48□□□□□ -1.85
ECM16YMR128W PSF1Q12488 208 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-LR1P0C2J4 438 aa3.48□□□□□ -1.85
ECM16YMR128W YOL162WP0CF19 215 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-FP0CX61 438 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-GR2P0CX62 438 aa3.48□□□□□ -1.85
ECM16YMR128W APA2P22108 325 aa3.48□□□□□ -1.85
ECM16YMR128W YSR3P23501 404 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-CP25383 438 aa3.48□□□□□ -1.85
ECM16YMR128W AHC2P25649 128 aa3.48□□□□□ -1.85
ECM16YMR128W YEF1P32622 495 aa3.48□□□□□ -1.85
ECM16YMR128W RTT105P40063 208 aa3.48□□□□□ -1.85
ECM16YMR128W BTT1P40314 149 aaPredicted RBP3.48□□□□□ -1.85
ECM16YMR128W APQ12P40532 138 aa3.48□□□□□ -1.85
ECM16YMR128W PRM10P42946 383 aa3.48□□□□□ -1.85
ECM16YMR128W SRB7P47822 140 aa3.48□□□□□ -1.85
ECM16YMR128W YGR042WP53227 271 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-DR2Q03483 438 aa3.48□□□□□ -1.85
ECM16YMR128W RSF1Q05043 376 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-BQ12260 438 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-OR2Q12293 438 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-DR1Q12392 438 aa3.48□□□□□ -1.85
ECM16YMR128W TY2A-OR1Q12439 438 aa3.48□□□□□ -1.85
ECM16YMR128W TMA7Q3E764 64 aaKnown RBP3.48□□□□□ -1.85
ECM16YMR128W TY2A-DR3Q99303 438 aa3.48□□□□□ -1.85
ECM16YMR128W YOR338WQ99326 363 aa3.48□□□□□ -1.85
ECM16YMR128W MAG1P22134 296 aaKnown RBP3.47□□□□□ -1.85
ECM16YMR128W PPH22P23595 377 aa3.47□□□□□ -1.85
ECM16YMR128W TIP1P27654 210 aaPredicted RBP3.47□□□□□ -1.85
ECM16YMR128W KKQ8P36004 724 aa3.47□□□□□ -1.85
ECM16YMR128W GMH1P36125 273 aa3.47□□□□□ -1.85
ECM16YMR128W DTR1P38125 572 aa3.47□□□□□ -1.85
ECM16YMR128W BNA4P38169 460 aa3.47□□□□□ -1.85
ECM16YMR128W ALP1P38971 573 aa3.47□□□□□ -1.85
ECM16YMR128W GGC1P38988 300 aa3.47□□□□□ -1.85
ECM16YMR128W YMR144WP40214 342 aaKnown RBP3.47□□□□□ -1.85
ECM16YMR128W COS10P52924 374 aa3.47□□□□□ -1.85
ECM16YMR128W ARG7Q04728 441 aa3.47□□□□□ -1.85
ECM16YMR128W ATG38Q05789 226 aaKnown RBP3.47□□□□□ -1.85
ECM16YMR128W CYK3Q07533 885 aa3.47□□□□□ -1.85
ECM16YMR128W YPL272CQ08984 517 aa3.47□□□□□ -1.85
ECM16YMR128W YLR122CQ12312 125 aa3.47□□□□□ -1.85
ECM16YMR128W SFG1Q12507 346 aa3.47□□□□□ -1.85
ECM16YMR128W VMA9Q3E7B6 73 aa3.47□□□□□ -1.85
ECM16YMR128W YFR010W-AP0C5N0 62 aa3.47□□□□□ -1.85
ECM16YMR128W GLK1P17709 500 aaKnown RBP3.47□□□□□ -1.85
ECM16YMR128W PBN1P25580 416 aa3.47□□□□□ -1.85
ECM16YMR128W NAM9P27929 486 aa3.47□□□□□ -1.85
ECM16YMR128W MSN4P33749 630 aa3.47□□□□□ -1.85
ECM16YMR128W BAT2P47176 376 aaKnown RBP3.47□□□□□ -1.85
ECM16YMR128W BNA7Q04066 261 aa3.47□□□□□ -1.85
ECM16YMR128W UTP15Q04305 513 aaKnown RBP3.47□□□□□ -1.85
ECM16YMR128W ANT1Q06497 328 aa3.47□□□□□ -1.85
ECM16YMR128W PUS9Q12069 462 aa3.47□□□□□ -1.85
ECM16YMR128W MED4Q12343 284 aa3.47□□□□□ -1.85
ECM16YMR128W SKM1Q12469 655 aa3.47□□□□□ -1.85
ECM16YMR128W YIL024CP40543 189 aa3.47□□□□□ -1.85
ECM16YMR128W PHO23P50947 330 aa3.47□□□□□ -1.85
ECM16YMR128W COS12P53053 380 aa3.47□□□□□ -1.85
ECM16YMR128W VHT1P53241 593 aa3.47□□□□□ -1.85
ECM16YMR128W YMR279CQ03263 540 aa3.47□□□□□ -1.85
ECM16YMR128W DCR2Q05924 578 aa3.47□□□□□ -1.85
ECM16YMR128W REX4Q08237 289 aa3.47□□□□□ -1.85
ECM16YMR128W YPR145C-AQ2V2P0 78 aa3.47□□□□□ -1.85
ECM16YMR128W CPA1P07258 411 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W STE50P25344 346 aa3.46□□□□□ -1.86
ECM16YMR128W RNQ1P25367 405 aa3.46□□□□□ -1.86
ECM16YMR128W SRB6P32570 121 aa3.46□□□□□ -1.86
ECM16YMR128W DOA4P32571 926 aa3.46□□□□□ -1.86
ECM16YMR128W RPS20P38701 121 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W YEL068CP39977 110 aa3.46□□□□□ -1.86
ECM16YMR128W UTP25P40498 721 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W COG7P53195 279 aa3.46□□□□□ -1.86
ECM16YMR128W TNA1P53322 534 aa3.46□□□□□ -1.86
ECM16YMR128W MNT4P53745 580 aa3.46□□□□□ -1.86
ECM16YMR128W YNR061CP53747 219 aa3.46□□□□□ -1.86
ECM16YMR128W RHO4Q00246 291 aa3.46□□□□□ -1.86
ECM16YMR128W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
ECM16YMR128W SKO1Q02100 647 aa3.46□□□□□ -1.86
ECM16YMR128W INP1Q03694 420 aa3.46□□□□□ -1.86
ECM16YMR128W RRP40Q08285 240 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W ICL2Q12031 575 aa3.46□□□□□ -1.86
ECM16YMR128W PHO2P07269 559 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms