RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG4	YMR107W	IPK1	Q06667	281 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	PDH1	Q12428	516 aa	Known RBP	4.86	□□□□□ -1.63
SPG4	YMR107W	YJR112W-A	Q3E743	109 aa		4.86	□□□□□ -1.63
SPG4	YMR107W	ATP4	P05626	244 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	ADH3	P07246	375 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	COX9	P07255	59 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	PHO2	P07269	559 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	MTF1	P14908	341 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	ZRC1	P20107	442 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	DCC1	P25559	380 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	COQ3	P27680	312 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	MSK1	P32048	576 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	MKK1	P32490	508 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	PAU2	P32612	120 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	TKL2	P33315	681 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	TIP20	P33891	701 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	CTF13	P35203	478 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	ADD66	P36040	267 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	BET3	P36149	193 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	APE3	P37302	537 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	PEX32	P38292	413 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	EHT1	P38295	451 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	PTC7	P38797	343 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	LRP1	P38801	184 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	ARO9	P38840	513 aa	Predicted RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	LOH1	P47055	219 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	PHB2	P50085	310 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	FRE4	P53746	719 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	PGA1	P53896	198 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	NRK1	P53915	240 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	EGD1	Q02642	157 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	PIR3	Q03180	325 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	LRS4	Q04087	347 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	BOP2	Q06150	570 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	ZEO1	Q08245	113 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	DCI1	Q08558	271 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	BTS1	Q12051	335 aa		4.85	□□□□□ -1.63
SPG4	YMR107W	ERG27	Q12452	347 aa	Known RBP	4.85	□□□□□ -1.63
SPG4	YMR107W	MATALPHA1	P0CY06	175 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	HMLALPHA1	P0CY07	175 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	MRP1	P10662	321 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	ERG4	P25340	473 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	TRX3	P25372	127 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	RSC6	P25632	483 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	ADE1	P27616	306 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	DRE2	P36152	348 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	OMA1	P36163	345 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	MRPL27	P36526	146 aa	Predicted RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	YBR197C	P38306	217 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	YPT31	P38555	223 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	RTC3	P38804	111 aa	Predicted RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	LYS20	P48570	428 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	AMA1	P50082	593 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	NPY1	P53164	384 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	SMM1	P53720	384 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	TRM112	P53738	135 aa	Predicted RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	SMX3	P54999	86 aa	Predicted RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	STD1	Q02794	444 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	ATC1	Q04005	294 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	SEC13	Q04491	297 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	SWF1	Q04629	336 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	BNA5	Q05979	453 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	GIC2	Q06648	383 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	BER1	Q06688	274 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	CRT10	Q08226	957 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	TGL5	Q12043	749 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	PRS5	Q12265	496 aa	Known RBP	4.84	□□□□□ -1.63
SPG4	YMR107W	NDJ1	Q12366	352 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	PCL9	Q12477	304 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	COX19	Q3E731	98 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	YOR338W	Q99326	363 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	FSH3	Q99369	266 aa		4.84	□□□□□ -1.63
SPG4	YMR107W	SOD2	P00447	233 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	RPL9A	P05738	191 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	YML003W	P0CF16	290 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	DPM1	P14020	267 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	PBN1	P25580	416 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	TRR1	P29509	319 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	BNA4	P38169	460 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	CHL4	P38907	458 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	YNL195C	P40168	261 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	YIL152W	P40455	235 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	EAF6	P47128	113 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	YJR120W	P47157	116 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	AVT4	P50944	713 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	RPL9B	P51401	191 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	MDM34	P53083	459 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	PNC1	P53184	216 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	BIO5	P53744	561 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	YNR065C	P53751	1116 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	PRM1	P53835	661 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	APJ1	P53940	528 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	MTQ1	P53944	314 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	EFM6	P53970	246 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	BUD25	P85052	153 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	TRM44	Q02648	567 aa	Known RBP	4.83	□□□□□ -1.64
SPG4	YMR107W	ASM4	Q05166	528 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	PEX30	Q06169	523 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	SRO7	Q12038	1033 aa		4.83	□□□□□ -1.64
SPG4	YMR107W	YNR034W-A	Q3E841	98 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms