RNA–Protein interactions for RNA: YMR051C

YMR051C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YMR051C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR051C	YMR051C	ZIP1	P31111	875 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	SPS19	P32573	292 aa	Known RBP	3.59	□□□□□ -1.83
YMR051C	YMR051C	ATG12	P38316	186 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	YGL262W	P53054	175 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	PEX31	P53203	462 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	FMP48	P53233	369 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	RNY1	Q02933	434 aa	Known RBP	3.59	□□□□□ -1.83
YMR051C	YMR051C	ADH6	Q04894	360 aa	Known RBP	3.59	□□□□□ -1.83
YMR051C	YMR051C	VIK1	Q12045	647 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	TRM10	Q12400	293 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	TFC7	Q12415	435 aa		3.59	□□□□□ -1.83
YMR051C	YMR051C	HIS1	P00498	297 aa	Known RBP	3.58	□□□□□ -1.84
YMR051C	YMR051C	ASP3-2	P0CX77	362 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	ASP3-3	P0CX78	362 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	ASP3-4	P0CX79	362 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	ASP3-1	P0CZ17	362 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	YCR025C	P25352	136 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	ATG15	P25641	520 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	VPH2	P32341	215 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	CDC13	P32797	924 aa	Known RBP	3.58	□□□□□ -1.84
YMR051C	YMR051C	FRM2	P37261	193 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	PRS2	P38620	318 aa	Known RBP	3.58	□□□□□ -1.84
YMR051C	YMR051C	DED81	P38707	554 aa	Known RBP	3.58	□□□□□ -1.84
YMR051C	YMR051C	RRT13	P40042	185 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	TAD2	P47058	250 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	HAL1	Q01766	294 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	PET117	Q02771	107 aa		3.58	□□□□□ -1.84
YMR051C	YMR051C	RUD3	Q12234	484 aa	Known RBP	3.58	□□□□□ -1.84
YMR051C	YMR051C	REV1	P12689	985 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	EPT1	P22140	391 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	SER33	P40510	469 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	VEL1	P53058	206 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	SWS2	P53937	143 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	INP1	Q03694	420 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	YMR244W	Q04018	355 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	PIN3	Q06449	215 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	YOL029C	Q08187	201 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	SME1	Q12330	94 aa	Predicted RBP	3.57	□□□□□ -1.84
YMR051C	YMR051C	DFM1	Q12743	341 aa	Known RBP	3.57	□□□□□ -1.84
YMR051C	YMR051C	YAL067W-A	Q8TGK6	75 aa		3.57	□□□□□ -1.84
YMR051C	YMR051C	PRS1	P32895	427 aa	Known RBP	3.56	□□□□□ -1.84
YMR051C	YMR051C	ZRT3	P34240	503 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	UTH1	P36135	365 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	MRX3	P38172	270 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	YER184C	P39961	794 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	YER085C	P40058	173 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	NBP1	P52919	319 aa	Predicted RBP	3.56	□□□□□ -1.84
YMR051C	YMR051C	ACT1	P60010	375 aa	Known RBP	3.56	□□□□□ -1.84
YMR051C	YMR051C	VPS60	Q03390	229 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	ECM19	Q06011	112 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	SEC10	Q06245	871 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	MSH5	Q12175	901 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	YAL063C-A	Q3E791	96 aa		3.56	□□□□□ -1.84
YMR051C	YMR051C	RPS5	P26783	225 aa	Known RBP	3.55	□□□□□ -1.84
YMR051C	YMR051C	DBP7	P36120	742 aa	Known RBP	3.55	□□□□□ -1.84
YMR051C	YMR051C	GCN20	P43535	752 aa	Known RBP	3.55	□□□□□ -1.84
YMR051C	YMR051C	YFL064C	P43540	174 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	MIC19	P43594	170 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	HIT1	P46973	164 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	ASG7	P46993	209 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	NBP35	P52920	328 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	LIF1	P53150	421 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	MAL13	P53338	473 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	YLR283W	Q05867	314 aa		3.55	□□□□□ -1.84
YMR051C	YMR051C	DIB1	Q06819	143 aa	Predicted RBP	3.55	□□□□□ -1.84
YMR051C	YMR051C	TIR4	Q12218	487 aa	Predicted RBP	3.55	□□□□□ -1.84
YMR051C	YMR051C	PSK1	P31374	1356 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	YAL064W-B	O13512	126 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	MRP1	P10662	321 aa	Known RBP	3.54	□□□□□ -1.84
YMR051C	YMR051C	RPB9	P27999	122 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	MSN4	P33749	630 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	AVT7	P40501	490 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	GLG2	P47011	380 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	SDC1	Q03323	175 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	CTR3	Q06686	241 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	PAM18	Q07914	168 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	YOS9	Q99220	542 aa		3.54	□□□□□ -1.84
YMR051C	YMR051C	TDH2	P00358	332 aa	Known RBP	3.53	□□□□□ -1.84
YMR051C	YMR051C	RPO26	P20435	155 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	COX10	P21592	462 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	PEX3	P28795	441 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	ALK2	P32789	676 aa	Predicted RBP	3.53	□□□□□ -1.84
YMR051C	YMR051C	AIM29	P36154	155 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	MRPL3	P36516	390 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	SHC1	P39000	512 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	DSN1	P40568	576 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	RPL10	P41805	221 aa	Known RBP	3.53	□□□□□ -1.84
YMR051C	YMR051C	YPL113C	Q02961	396 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	CSM4	Q08955	156 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	PER33	Q12144	273 aa		3.53	□□□□□ -1.84
YMR051C	YMR051C	CFT1	Q06632	1357 aa	Known RBP	3.52	□□□□□ -1.85
YMR051C	YMR051C	SOD1	P00445	154 aa	Known RBP	3.52	□□□□□ -1.85
YMR051C	YMR051C	YCR016W	P25617	290 aa	Known RBP	3.52	□□□□□ -1.85
YMR051C	YMR051C	EHD3	P28817	500 aa		3.52	□□□□□ -1.85
YMR051C	YMR051C	QRI5	P32344	111 aa		3.52	□□□□□ -1.85
YMR051C	YMR051C	ECM34	P38728	170 aa		3.52	□□□□□ -1.85
YMR051C	YMR051C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
YMR051C	YMR051C	SMB1	P40018	196 aa	Known RBP	3.52	□□□□□ -1.85
YMR051C	YMR051C	YJR012C	P47087	207 aa		3.52	□□□□□ -1.85
YMR051C	YMR051C	UTP15	Q04305	513 aa	Known RBP	3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms