RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	YKL162C	P36052	402 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	APL3	P38065	1025 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	IST2	P38250	946 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	YPC1	P38298	316 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	TRM9	P49957	279 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	ARO8	P53090	500 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	ROG1	P53118	685 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	YPL108W	Q02872	168 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	CGI121	Q03705	181 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	TPP1	Q03796	238 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	ADH6	Q04894	360 aa	Known RBP	4.63	□□□□□ -1.67
SEC39	YLR440C	MDM30	Q05930	598 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	SUE1	Q06524	206 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	AIM6	Q07716	390 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	SLD7	Q08457	257 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	YKL033W-A	Q86ZR7	236 aa		4.63	□□□□□ -1.67
SEC39	YLR440C	ADE4	P04046	510 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	PDE1	P22434	369 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	ARP2	P32381	391 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	SGE1	P33335	543 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	CMC1	P36064	111 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	PRY2	P36110	329 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	YKR051W	P36142	418 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	TRM7	P38238	310 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	DOG2	P38773	246 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	LSB3	P43603	459 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	STE24	P47154	453 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	BUD32	P53323	261 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	YVH1	Q02256	364 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	TDA1	Q03533	586 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	CAC2	Q04199	468 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	GAS2	Q06135	555 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	YOR059C	Q08448	450 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	SPC3	Q12133	184 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	TY1A-BL	Q12266	440 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	RIB2	Q12362	591 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	ERG27	Q12452	347 aa	Known RBP	4.62	□□□□□ -1.67
SEC39	YLR440C	BI3	Q9ZZW7	517 aa		4.62	□□□□□ -1.67
SEC39	YLR440C	SLY41	P22215	453 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YPS1	P32329	569 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	FRE1	P32791	686 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	PTM1	P32857	523 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	TIR2	P33890	251 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	KTR3	P38130	404 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	AVT5	P38176	459 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	VBA2	P38358	474 aa	Known RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	SKN7	P38889	622 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	PLB1	P39105	664 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	HEM14	P40012	539 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	PHM8	P40025	321 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	NIF3	P53081	288 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YGL039W	P53183	348 aa	Known RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	HHO1	P53551	258 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	BIO5	P53744	561 aa	Known RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	IBD2	P53892	351 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	TRM12	Q04235	462 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	IPK1	Q06667	281 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YPR071W	Q12346	211 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	PRP46	Q12417	451 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	IZH4	Q99393	312 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	GAL80	P04387	435 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	COR1	P07256	457 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	CTA1	P15202	515 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	PUT3	P25502	979 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	PTC6	P25646	442 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	ARO2	P28777	376 aa	Known RBP	4.61	□□□□□ -1.67
SEC39	YLR440C	MRP49	P32388	137 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	EMP70	P32802	667 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	ROT2	P38138	954 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YBR137W	P38276	179 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	HXT13	P39924	564 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	ZAP1	P47043	880 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	SPT20	P50875	604 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	PHO23	P50947	330 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	HXT17	P53631	564 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YML037C	Q03703	340 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YET2	Q04210	160 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	TY1A-MR1	Q04215	440 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	TAF9	Q05027	157 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YLR446W	Q06204	433 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	MRPL35	Q06678	367 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	ATG10	Q07879	167 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	GEP3	Q08622	556 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	MDM32	Q12171	622 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	YDR018C	Q12185	396 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	COX17	Q12287	69 aa		4.61	□□□□□ -1.67
SEC39	YLR440C	DED1	P06634	604 aa	Known RBP	4.6	□□□□□ -1.67
SEC39	YLR440C	UTR2	P32623	467 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	SSN3	P39073	555 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	SNU13	P39990	126 aa	Known RBP	4.6	□□□□□ -1.67
SEC39	YLR440C	DSE1	P40077	573 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	BTT1	P40314	149 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC39	YLR440C	CHA4	P43634	648 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	YGR149W	P48236	432 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	GTR2	P53290	341 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	HST3	P53687	447 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	YDR366C	P87287	132 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	ELC1	Q03071	99 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	SEI1	Q06058	285 aa		4.6	□□□□□ -1.67
SEC39	YLR440C	YTH1	Q06102	208 aa	Predicted RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms