RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	AST1	P35183	429 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	SBE22	P38814	852 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	PRE6	P40303	254 aa	Known RBP	5.76	□□□□□ -1.49
TSR2	YLR435W	AGP3	P43548	558 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	YGL235W	P53071	178 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	ASI1	P54074	624 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	YDR239C	Q03780	787 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	SEC13	Q04491	297 aa	Known RBP	5.76	□□□□□ -1.49
TSR2	YLR435W	YPR147C	Q06522	304 aa	Known RBP	5.76	□□□□□ -1.49
TSR2	YLR435W	YDL180W	Q12301	547 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	HMS1	Q12398	434 aa		5.76	□□□□□ -1.49
TSR2	YLR435W	HEM4	P06174	275 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	RHO1	P06780	209 aa	Known RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	FBA1	P14540	359 aa	Known RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	RRP7	P25368	297 aa	Predicted RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	MCM10	P32354	571 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
TSR2	YLR435W	GPX1	P36014	167 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	YKL071W	P36086	256 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	RPS20	P38701	121 aa	Known RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
TSR2	YLR435W	THO1	P40040	218 aa	Known RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	GET2	P40056	285 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	CAF16	P43569	289 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	MPP6	P53725	186 aa	Predicted RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	YDR102C	Q03864	110 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	UTP21	Q06078	939 aa	Predicted RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	SNT309	Q06091	175 aa	Predicted RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	RGC1	Q06108	1083 aa	Known RBP	5.75	□□□□□ -1.49
TSR2	YLR435W	RAF1	Q06891	181 aa		5.75	□□□□□ -1.49
TSR2	YLR435W	PEP4	P07267	405 aa	Known RBP	5.74	□□□□□ -1.49
TSR2	YLR435W	CPR2	P23285	205 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	POL4	P25615	582 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	PPA2	P28239	310 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	PUP2	P32379	260 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	PRP19	P32523	503 aa	Known RBP	5.74	□□□□□ -1.49
TSR2	YLR435W	TRS65	P32893	560 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	MRPL6	P32904	214 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	MRPL39	P36533	70 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	SEN34	P39707	275 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	YRB2	P40517	327 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	GPP1	P41277	250 aa	Known RBP	5.74	□□□□□ -1.49
TSR2	YLR435W	YFL051C	P43552	160 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	RRN9	P53437	365 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	ABZ2	Q03266	374 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	UIP4	Q08926	304 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	USV1	Q12132	391 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	APC2	Q12440	853 aa		5.74	□□□□□ -1.49
TSR2	YLR435W	MET2	P08465	486 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	RPI1	P23250	407 aa	Known RBP	5.73	□□□□□ -1.49
TSR2	YLR435W	GIT1	P25346	518 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
TSR2	YLR435W	NIC96	P34077	839 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	YBR063C	P38083	404 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	CHK1	P38147	527 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	GDI1	P39958	451 aa	Known RBP	5.73	□□□□□ -1.49
TSR2	YLR435W	ISC1	P40015	477 aa	Known RBP	5.73	□□□□□ -1.49
TSR2	YLR435W	IDP2	P41939	412 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	STB1	P42845	420 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	PCP1	P53259	346 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	MRPL1	Q04599	285 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	CTS2	Q06350	511 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	NIP7	Q08962	181 aa	Known RBP	5.73	□□□□□ -1.49
TSR2	YLR435W	GRE1	Q08969	168 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	RTN2	Q12443	393 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	SET6	Q12529	373 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	YHR214C-E	Q8TGK0	99 aa		5.73	□□□□□ -1.49
TSR2	YLR435W	NFT1	P0CE68	1218 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	SEC12	P11655	471 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	ATR1	P13090	542 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	YCL042W	P25572	119 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	THI4	P32318	326 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	VPH2	P32341	215 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	MSN4	P33749	630 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	MTR2	P34232	184 aa	Known RBP	5.72	□□□□□ -1.49
TSR2	YLR435W	YBR138C	P38277	524 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	RRG9	P40156	214 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	SNL1	P40548	159 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	YGL101W	P53144	215 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	YMR099C	Q03161	297 aa	Known RBP	5.72	□□□□□ -1.49
TSR2	YLR435W	SMP3	Q04174	516 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	ELP6	Q04868	273 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	MHF1	Q3E835	90 aa		5.72	□□□□□ -1.49
TSR2	YLR435W	DPM1	P14020	267 aa	Known RBP	5.71	□□□□□ -1.5
TSR2	YLR435W	YGP1	P38616	354 aa	Known RBP	5.71	□□□□□ -1.5
TSR2	YLR435W	ARN2	P38724	620 aa		5.71	□□□□□ -1.5
TSR2	YLR435W	ILM1	P47155	203 aa		5.71	□□□□□ -1.5
TSR2	YLR435W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
TSR2	YLR435W	RTC5	Q12108	567 aa	Known RBP	5.71	□□□□□ -1.5
TSR2	YLR435W	RIB3	Q99258	208 aa		5.71	□□□□□ -1.5
TSR2	YLR435W	TPK3	P05986	398 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	CDC36	P06100	191 aa	Predicted RBP	5.7	□□□□□ -1.5
TSR2	YLR435W	PCL1	P24867	279 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	MRPS5	P33759	307 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	ECM8	P38246	354 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	CHL4	P38907	458 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	PAC2	P39937	518 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	SWP82	P43554	623 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	MOB2	P43563	287 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	IDS2	P46958	469 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 114.2 ms