RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YTM1Q12024 460 aaPredicted RBP8.38□□□□□ -1.07
SFP1YLR403W YDR018CQ12185 396 aa8.38□□□□□ -1.07
SFP1YLR403W FRE8Q12209 686 aa8.38□□□□□ -1.07
SFP1YLR403W RTN2Q12443 393 aa8.38□□□□□ -1.07
SFP1YLR403W YOL163WP0CF20 169 aa8.38□□□□□ -1.07
SFP1YLR403W YCR102CP25608 368 aa8.38□□□□□ -1.07
SFP1YLR403W YEF1P32622 495 aa8.38□□□□□ -1.07
SFP1YLR403W APL3P38065 1025 aa8.38□□□□□ -1.07
SFP1YLR403W DER1P38307 211 aa8.38□□□□□ -1.07
SFP1YLR403W PEP8P40335 379 aa8.38□□□□□ -1.07
SFP1YLR403W IME4P41833 600 aa8.38□□□□□ -1.07
SFP1YLR403W FIG4P42837 879 aa8.38□□□□□ -1.07
SFP1YLR403W ROG1P53118 685 aa8.38□□□□□ -1.07
SFP1YLR403W SMX3P54999 86 aaPredicted RBP8.38□□□□□ -1.07
SFP1YLR403W DPP1Q05521 289 aa8.38□□□□□ -1.07
SFP1YLR403W HRD3Q05787 833 aa8.38□□□□□ -1.07
SFP1YLR403W BSP1Q06604 576 aa8.38□□□□□ -1.07
SFP1YLR403W TY1A-BLQ12266 440 aa8.38□□□□□ -1.07
SFP1YLR403W PDA1P16387 420 aaKnown RBP8.37□□□□□ -1.07
SFP1YLR403W TIP20P33891 701 aa8.37□□□□□ -1.07
SFP1YLR403W SBH2P52871 88 aa8.37□□□□□ -1.07
SFP1YLR403W DUS1P53759 423 aaKnown RBP8.37□□□□□ -1.07
SFP1YLR403W SPR6Q01684 191 aa8.37□□□□□ -1.07
SFP1YLR403W OAZ1Q02803 292 aa8.37□□□□□ -1.07
SFP1YLR403W GOT1Q03554 138 aa8.37□□□□□ -1.07
SFP1YLR403W DAL4Q04895 635 aa8.37□□□□□ -1.07
SFP1YLR403W YPR109WQ06104 294 aa8.37□□□□□ -1.07
SFP1YLR403W CNL1Q06333 122 aa8.37□□□□□ -1.07
SFP1YLR403W IPK1Q06667 281 aa8.37□□□□□ -1.07
SFP1YLR403W YLR099W-AQ3E798 87 aa8.37□□□□□ -1.07
SFP1YLR403W CYT1P07143 309 aa8.36□□□□□ -1.07
SFP1YLR403W RER2P35196 286 aa8.36□□□□□ -1.07
SFP1YLR403W TMA19P35691 167 aaKnown RBP8.36□□□□□ -1.07
SFP1YLR403W KKQ8P36004 724 aa8.36□□□□□ -1.07
SFP1YLR403W OMA1P36163 345 aa8.36□□□□□ -1.07
SFP1YLR403W ADH5P38113 351 aaKnown RBP8.36□□□□□ -1.07
SFP1YLR403W FLR1P38124 548 aa8.36□□□□□ -1.07
SFP1YLR403W SRP68P38687 599 aaKnown RBP8.36□□□□□ -1.07
SFP1YLR403W MUP3P38734 546 aa8.36□□□□□ -1.07
SFP1YLR403W TAT2P38967 592 aa8.36□□□□□ -1.07
SFP1YLR403W CAK1P43568 368 aaPredicted RBP8.36□□□□□ -1.07
SFP1YLR403W YGL114WP53134 725 aa8.36□□□□□ -1.07
SFP1YLR403W TY1A-MR1Q04215 440 aa8.36□□□□□ -1.07
SFP1YLR403W YMR315WQ04869 349 aaKnown RBP8.36□□□□□ -1.07
SFP1YLR403W COQ10Q08058 207 aa8.36□□□□□ -1.07
SFP1YLR403W SUS1Q6WNK7 96 aa8.36□□□□□ -1.07
SFP1YLR403W FKS3Q04952 1785 aa8.36□□□□□ -1.07
SFP1YLR403W SAL1D6W196 494 aa8.36□□□□□ -1.07
SFP1YLR403W THP2O13539 261 aaKnown RBP8.36□□□□□ -1.07
SFP1YLR403W ERS1P17261 260 aa8.36□□□□□ -1.07
SFP1YLR403W MDH1P17505 334 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
SFP1YLR403W SEC22P22214 214 aa8.36□□□□□ -1.07
SFP1YLR403W STE50P25344 346 aa8.36□□□□□ -1.07
SFP1YLR403W BCS1P32839 456 aa8.36□□□□□ -1.07
SFP1YLR403W MSN2P33748 704 aa8.36□□□□□ -1.07
SFP1YLR403W YAR028WP39548 234 aa8.36□□□□□ -1.07
SFP1YLR403W BAP3P41815 604 aa8.36□□□□□ -1.07
SFP1YLR403W VPS73P53142 486 aaKnown RBP8.36□□□□□ -1.07
SFP1YLR403W NPY1P53164 384 aa8.36□□□□□ -1.07
SFP1YLR403W PPN1Q04119 674 aa8.36□□□□□ -1.07
SFP1YLR403W YLR456WQ06199 204 aa8.36□□□□□ -1.07
SFP1YLR403W CUR1Q06469 252 aa8.36□□□□□ -1.07
SFP1YLR403W PRR2Q12310 699 aa8.36□□□□□ -1.07
SFP1YLR403W QCR7P00128 127 aa8.35□□□□□ -1.07
SFP1YLR403W YPR170W-BP0C5R9 85 aa8.35□□□□□ -1.07
SFP1YLR403W EST1P17214 699 aaPredicted RBP8.35□□□□□ -1.07
SFP1YLR403W PRP45P28004 379 aaPredicted RBP8.35□□□□□ -1.07
SFP1YLR403W SKG6P32900 734 aaPredicted RBP8.35□□□□□ -1.07
SFP1YLR403W PTK1P36002 662 aaPredicted RBP8.35□□□□□ -1.07
SFP1YLR403W PHO89P38361 574 aa8.35□□□□□ -1.07
SFP1YLR403W GPP2P40106 250 aaKnown RBP8.35□□□□□ -1.07
SFP1YLR403W TOS3P43637 560 aa8.35□□□□□ -1.07
SFP1YLR403W YGR053CP53234 283 aa8.35□□□□□ -1.07
SFP1YLR403W ASI3P53983 676 aa8.35□□□□□ -1.07
SFP1YLR403W YML018CQ03730 393 aa8.35□□□□□ -1.07
SFP1YLR403W TCO89Q08921 799 aa8.35□□□□□ -1.07
SFP1YLR403W FOL3Q12676 427 aaPredicted RBP8.35□□□□□ -1.07
SFP1YLR403W RPL27AP0C2H6 136 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W RPL27BP0C2H7 136 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W RPS4AP0CX35 261 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W RPS4BP0CX36 261 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W MRPL11P36521 249 aaPredicted RBP8.34□□□□□ -1.07
SFP1YLR403W AHP1P38013 176 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W YHL044WP38727 235 aa8.34□□□□□ -1.07
SFP1YLR403W YHL041WP38730 149 aa8.34□□□□□ -1.07
SFP1YLR403W MTO1P53070 669 aa8.34□□□□□ -1.07
SFP1YLR403W YGR273CP53329 174 aa8.34□□□□□ -1.07
SFP1YLR403W PDR16P53860 351 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W ELC1Q03071 99 aa8.34□□□□□ -1.07
SFP1YLR403W ADH6Q04894 360 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W ENT4Q07872 247 aa8.34□□□□□ -1.07
SFP1YLR403W TMS1Q12116 473 aa8.34□□□□□ -1.07
SFP1YLR403W UPC2Q12151 913 aa8.34□□□□□ -1.07
SFP1YLR403W TRM13Q12383 476 aa8.34□□□□□ -1.07
SFP1YLR403W HRP1Q99383 534 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W ALG7P07286 448 aa8.34□□□□□ -1.07
SFP1YLR403W ERD1P16151 362 aa8.34□□□□□ -1.07
SFP1YLR403W SNF5P18480 905 aa8.34□□□□□ -1.07
SFP1YLR403W ERG3P32353 365 aa8.34□□□□□ -1.07
SFP1YLR403W MDH3P32419 343 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms