RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MTM1P53320 366 aa8.21□□□□□ -1.09
SEC61YLR378C ATG21Q02887 496 aa8.21□□□□□ -1.09
SEC61YLR378C NNT1Q05874 261 aa8.21□□□□□ -1.09
SEC61YLR378C MRPL35Q06678 367 aa8.21□□□□□ -1.09
SEC61YLR378C HSP42Q12329 375 aa8.21□□□□□ -1.09
SEC61YLR378C GPM1P00950 247 aaKnown RBP8.2□□□□□ -1.1
SEC61YLR378C OPI3P05375 206 aa8.2□□□□□ -1.1
SEC61YLR378C PDX1P16451 410 aa8.2□□□□□ -1.1
SEC61YLR378C KRR1P25586 316 aaPredicted RBP8.2□□□□□ -1.1
SEC61YLR378C HYM1P32464 399 aa8.2□□□□□ -1.1
SEC61YLR378C SHO1P40073 367 aa8.2□□□□□ -1.1
SEC61YLR378C DPB11P47027 764 aaPredicted RBP8.2□□□□□ -1.1
SEC61YLR378C PDR16P53860 351 aaKnown RBP8.2□□□□□ -1.1
SEC61YLR378C LSM7P53905 115 aaKnown RBP8.2□□□□□ -1.1
SEC61YLR378C PLB2Q03674 706 aa8.2□□□□□ -1.1
SEC61YLR378C GIS1Q03833 894 aa8.2□□□□□ -1.1
SEC61YLR378C MIX14Q04341 121 aa8.2□□□□□ -1.1
SEC61YLR378C TPO3Q06451 622 aa8.2□□□□□ -1.1
SEC61YLR378C SSK1Q07084 712 aa8.2□□□□□ -1.1
SEC61YLR378C MIM1Q08176 113 aa8.2□□□□□ -1.1
SEC61YLR378C RAX1Q08760 435 aa8.2□□□□□ -1.1
SEC61YLR378C YLR125WQ12138 136 aa8.2□□□□□ -1.1
SEC61YLR378C SCM3Q12334 223 aa8.2□□□□□ -1.1
SEC61YLR378C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1 RIP-Chip
SEC61YLR378C MTR10Q99189 972 aa8.2□□□□□ -1.1
SEC61YLR378C HFA1P32874 2273 aa8.2□□□□□ -1.1
SEC61YLR378C CYC1P00044 109 aaPredicted RBP8.2□□□□□ -1.1
SEC61YLR378C PDA1P16387 420 aaKnown RBP8.2□□□□□ -1.1
SEC61YLR378C PPA2P28239 310 aa8.2□□□□□ -1.1
SEC61YLR378C SDS24P38314 527 aa8.2□□□□□ -1.1
SEC61YLR378C PTH1P38876 190 aaKnown RBP8.2□□□□□ -1.1
SEC61YLR378C MSS4P38994 779 aa8.2□□□□□ -1.1
SEC61YLR378C SLS1P42900 643 aa8.2□□□□□ -1.1
SEC61YLR378C BNA6P43619 295 aa8.2□□□□□ -1.1
SEC61YLR378C YJR120WP47157 116 aa8.2□□□□□ -1.1
SEC61YLR378C ATG41Q12048 136 aa8.2□□□□□ -1.1
SEC61YLR378C ADK1P07170 222 aaKnown RBP8.19□□□□□ -1.1
SEC61YLR378C PHO4P07270 312 aaKnown RBP8.19□□□□□ -1.1
SEC61YLR378C SPO7P18410 259 aa8.19□□□□□ -1.1
SEC61YLR378C STE18P18852 110 aa8.19□□□□□ -1.1
SEC61YLR378C LDB16P25587 256 aa8.19□□□□□ -1.1
SEC61YLR378C YCR102CP25608 368 aa8.19□□□□□ -1.1
SEC61YLR378C NAM9P27929 486 aa8.19□□□□□ -1.1
SEC61YLR378C THI4P32318 326 aa8.19□□□□□ -1.1
SEC61YLR378C RCN1P36054 211 aa8.19□□□□□ -1.1
SEC61YLR378C CHS7P38843 316 aa8.19□□□□□ -1.1
SEC61YLR378C RMD9P53140 646 aaKnown RBP8.19□□□□□ -1.1
SEC61YLR378C YGR066CP53242 292 aa8.19□□□□□ -1.1
SEC61YLR378C RSM10Q03201 203 aa8.19□□□□□ -1.1
SEC61YLR378C SDC1Q03323 175 aa8.19□□□□□ -1.1
SEC61YLR378C VBA4Q04602 768 aaKnown RBP8.19□□□□□ -1.1
SEC61YLR378C PEX30Q06169 523 aa8.19□□□□□ -1.1
SEC61YLR378C SYC1Q08553 188 aaPredicted RBP8.19□□□□□ -1.1
SEC61YLR378C NIP7Q08962 181 aaKnown RBP8.19□□□□□ -1.1
SEC61YLR378C MDM32Q12171 622 aa8.19□□□□□ -1.1
SEC61YLR378C GLT1Q12680 2145 aaKnown RBP8.19□□□□□ -1.1
SEC61YLR378C YFR010W-AP0C5N0 62 aa8.18□□□□□ -1.1
SEC61YLR378C PET54P10834 293 aa8.18□□□□□ -1.1
SEC61YLR378C CPR3P25719 182 aa8.18□□□□□ -1.1
SEC61YLR378C ERG9P29704 444 aa8.18□□□□□ -1.1
SEC61YLR378C PRE4P30657 266 aa8.18□□□□□ -1.1
SEC61YLR378C MCM10P32354 571 aa8.18□□□□□ -1.1
SEC61YLR378C YKE4P40544 346 aa8.18□□□□□ -1.1
SEC61YLR378C ECO1P43605 281 aa8.18□□□□□ -1.1
SEC61YLR378C BSC5P53755 489 aa8.18□□□□□ -1.1
SEC61YLR378C YLR152CP54072 576 aa8.18□□□□□ -1.1
SEC61YLR378C AGE1Q04412 482 aa8.18□□□□□ -1.1
SEC61YLR378C NMA1Q06178 401 aaKnown RBP8.18□□□□□ -1.1
SEC61YLR378C CTS2Q06350 511 aa8.18□□□□□ -1.1
SEC61YLR378C HTZ1Q12692 134 aaKnown RBP8.18□□□□□ -1.1
SEC61YLR378C RIP1P08067 215 aa8.17□□□□□ -1.1
SEC61YLR378C RPL40AP0CH08 128 aaKnown RBP8.17□□□□□ -1.1
SEC61YLR378C RPL40BP0CH09 128 aaKnown RBP8.17□□□□□ -1.1
SEC61YLR378C UTR1P21373 530 aa8.17□□□□□ -1.1
SEC61YLR378C CAM1P29547 415 aaKnown RBP8.17□□□□□ -1.1
SEC61YLR378C ATS1P31386 333 aa8.17□□□□□ -1.1
SEC61YLR378C PDR3P33200 976 aa8.17□□□□□ -1.1
SEC61YLR378C YBR242WP38331 238 aa8.17□□□□□ -1.1
SEC61YLR378C HTD2P38790 280 aaKnown RBP8.17□□□□□ -1.1
SEC61YLR378C RFC4P40339 323 aaKnown RBP8.17□□□□□ -1.1
SEC61YLR378C IKS1P47042 667 aa8.17□□□□□ -1.1
SEC61YLR378C LYS5P50113 272 aa8.17□□□□□ -1.1
SEC61YLR378C AIM36Q03798 255 aa8.17□□□□□ -1.1
SEC61YLR378C PHO92Q06390 306 aa8.17□□□□□ -1.1
SEC61YLR378C HMS1Q12398 434 aa8.17□□□□□ -1.1
SEC61YLR378C RRI1Q12468 440 aa8.17□□□□□ -1.1
SEC61YLR378C ACC1Q00955 2233 aaKnown RBP8.17□□□□□ -1.1
SEC61YLR378C MEK1P24719 497 aaPredicted RBP8.16□□□□□ -1.1
SEC61YLR378C CNE1P27825 502 aa8.16□□□□□ -1.1
SEC61YLR378C ERG24P32462 438 aaKnown RBP8.16□□□□□ -1.1
SEC61YLR378C COS9P36034 407 aa8.16□□□□□ -1.1
SEC61YLR378C SMB1P40018 196 aaKnown RBP8.16□□□□□ -1.1
SEC61YLR378C SER3P40054 469 aa8.16□□□□□ -1.1
SEC61YLR378C SLZ1P40167 298 aa8.16□□□□□ -1.1
SEC61YLR378C DLS1P40366 167 aa8.16□□□□□ -1.1
SEC61YLR378C TIR3P40552 269 aa8.16□□□□□ -1.1
SEC61YLR378C AAD14P42884 376 aa8.16□□□□□ -1.1
SEC61YLR378C LYS20P48570 428 aaKnown RBP8.16□□□□□ -1.1
SEC61YLR378C SLI1P53304 468 aa8.16□□□□□ -1.1
SEC61YLR378C HOL1P53389 586 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms