RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YNL095CP53932 642 aa2.21□□□□□ -2.06
SMD2YLR275W OSH6Q02201 448 aa2.21□□□□□ -2.06
SMD2YLR275W YLR413WQ06689 675 aa2.21□□□□□ -2.06
SMD2YLR275W YPL278CQ08990 100 aa2.21□□□□□ -2.06
SMD2YLR275W MRPL23Q12487 163 aaPredicted RBP2.21□□□□□ -2.06
SMD2YLR275W SNF6P18888 332 aa2.2□□□□□ -2.06
SMD2YLR275W IFM1P25038 676 aa2.2□□□□□ -2.06
SMD2YLR275W CDC13P32797 924 aaKnown RBP2.2□□□□□ -2.06
SMD2YLR275W YKL063CP35725 167 aa2.2□□□□□ -2.06
SMD2YLR275W YBR062CP38239 180 aa2.2□□□□□ -2.06
SMD2YLR275W TDA11P38854 504 aa2.2□□□□□ -2.06
SMD2YLR275W YIL012WP40551 113 aa2.2□□□□□ -2.06
SMD2YLR275W GCD14P46959 383 aaPredicted RBP2.2□□□□□ -2.06
SMD2YLR275W UBC13P52490 153 aa2.2□□□□□ -2.06
SMD2YLR275W EGD1Q02642 157 aaKnown RBP2.2□□□□□ -2.06
SMD2YLR275W ECM18Q04623 453 aa2.2□□□□□ -2.06
SMD2YLR275W ERV41Q04651 352 aa2.2□□□□□ -2.06
SMD2YLR275W BCP1Q06338 283 aa2.2□□□□□ -2.06
SMD2YLR275W YPR064WQ12492 139 aa2.2□□□□□ -2.06
SMD2YLR275W GCG1P32656 232 aaKnown RBP2.19□□□□□ -2.06
SMD2YLR275W TPO5P36029 618 aa2.19□□□□□ -2.06
SMD2YLR275W YBL081WP38180 368 aaKnown RBP2.19□□□□□ -2.06
SMD2YLR275W YGP1P38616 354 aaKnown RBP2.19□□□□□ -2.06
SMD2YLR275W HIS2P38635 335 aa2.19□□□□□ -2.06
SMD2YLR275W MED6P38782 295 aa2.19□□□□□ -2.06
SMD2YLR275W VPS45P38932 577 aa2.19□□□□□ -2.06
SMD2YLR275W SYS1P41544 203 aa2.19□□□□□ -2.06
SMD2YLR275W GDS1P41913 522 aa2.19□□□□□ -2.06
SMD2YLR275W AGP3P43548 558 aa2.19□□□□□ -2.06
SMD2YLR275W GTO1P48239 356 aa2.19□□□□□ -2.06
SMD2YLR275W YGL185CP53100 379 aa2.19□□□□□ -2.06
SMD2YLR275W YNL260CP53846 198 aa2.19□□□□□ -2.06
SMD2YLR275W YNL050CP53952 270 aa2.19□□□□□ -2.06
SMD2YLR275W ERV25P54837 211 aaKnown RBP2.19□□□□□ -2.06
SMD2YLR275W YPL077CQ02831 240 aa2.19□□□□□ -2.06
SMD2YLR275W ASR1Q06834 288 aa2.19□□□□□ -2.06
SMD2YLR275W ICL1P28240 557 aaPredicted RBP2.18□□□□□ -2.06
SMD2YLR275W IMP3P32899 183 aaPredicted RBP2.18□□□□□ -2.06
SMD2YLR275W CAB3P36076 571 aa2.18□□□□□ -2.06
SMD2YLR275W RPC37P36121 282 aa2.18□□□□□ -2.06
SMD2YLR275W MRPL3P36516 390 aa2.18□□□□□ -2.06
SMD2YLR275W YIA6P40556 373 aa2.18□□□□□ -2.06
SMD2YLR275W PRP24P49960 444 aaKnown RBP2.18□□□□□ -2.06
SMD2YLR275W SYF2P53277 215 aaPredicted RBP2.18□□□□□ -2.06
SMD2YLR275W GPN3Q06543 272 aa2.18□□□□□ -2.06
SMD2YLR275W BER1Q06688 274 aaKnown RBP2.18□□□□□ -2.06
SMD2YLR275W TIM22Q12328 207 aa2.18□□□□□ -2.06
SMD2YLR275W ATP6P00854 259 aa2.17□□□□□ -2.06
SMD2YLR275W RPC40P07703 335 aaKnown RBP2.17□□□□□ -2.06
SMD2YLR275W MEK1P24719 497 aaPredicted RBP2.17□□□□□ -2.06
SMD2YLR275W YCR025CP25352 136 aa2.17□□□□□ -2.06
SMD2YLR275W IMP1P28627 190 aa2.17□□□□□ -2.06
SMD2YLR275W YER188WP40103 239 aa2.17□□□□□ -2.06
SMD2YLR275W MPP10P47083 593 aaKnown RBP2.17□□□□□ -2.06
SMD2YLR275W MIG2P53035 382 aa2.17□□□□□ -2.06
SMD2YLR275W RSM27P53305 110 aa2.17□□□□□ -2.06
SMD2YLR275W TAZ1Q06510 381 aa2.17□□□□□ -2.06
SMD2YLR275W POM33Q12164 279 aa2.17□□□□□ -2.06
SMD2YLR275W PRR2Q12310 699 aa2.17□□□□□ -2.06
SMD2YLR275W ILV1P00927 576 aaKnown RBP2.16□□□□□ -2.06
SMD2YLR275W TFS1P14306 219 aa2.16□□□□□ -2.06
SMD2YLR275W EBP2P36049 427 aaKnown RBP2.16□□□□□ -2.06
SMD2YLR275W YKL070WP36087 169 aa2.16□□□□□ -2.06
SMD2YLR275W PEX18P38855 283 aa2.16□□□□□ -2.06
SMD2YLR275W VAB2P40003 282 aa2.16□□□□□ -2.06
SMD2YLR275W GPI8P49018 411 aa2.16□□□□□ -2.06
SMD2YLR275W MND1P53102 219 aa2.16□□□□□ -2.06
SMD2YLR275W ALG9P53868 555 aaKnown RBP2.16□□□□□ -2.06
SMD2YLR275W NNT1Q05874 261 aa2.16□□□□□ -2.06
SMD2YLR275W PHO80P20052 293 aa2.15□□□□□ -2.07
SMD2YLR275W RPS0AP32905 252 aaKnown RBP2.15□□□□□ -2.07
SMD2YLR275W SPT4P32914 102 aaPredicted RBP2.15□□□□□ -2.07
SMD2YLR275W KRE29P40026 464 aa2.15□□□□□ -2.07
SMD2YLR275W AVT6P40074 448 aa2.15□□□□□ -2.07
SMD2YLR275W SHQ1P40486 507 aaPredicted RBP2.15□□□□□ -2.07
SMD2YLR275W MNN5P46982 586 aa2.15□□□□□ -2.07
SMD2YLR275W YPT32P51996 222 aaKnown RBP2.15□□□□□ -2.07
SMD2YLR275W YMR209CQ03648 457 aa2.15□□□□□ -2.07
SMD2YLR275W DPP1Q05521 289 aa2.15□□□□□ -2.07
SMD2YLR275W YDL144CQ07589 356 aa2.15□□□□□ -2.07
SMD2YLR275W FMP16Q12497 93 aa2.15□□□□□ -2.07
SMD2YLR275W ZWF1P11412 505 aaKnown RBP2.14□□□□□ -2.07
SMD2YLR275W FRS2P15625 503 aaKnown RBP2.14□□□□□ -2.07
SMD2YLR275W YSR3P23501 404 aa2.14□□□□□ -2.07
SMD2YLR275W SSA3P09435 649 aaKnown RBP2.13□□□□□ -2.07
SMD2YLR275W OM45P16547 393 aa2.13□□□□□ -2.07
SMD2YLR275W AEP1P32493 518 aa2.13□□□□□ -2.07
SMD2YLR275W TRM7P38238 310 aaKnown RBP2.13□□□□□ -2.07
SMD2YLR275W MBA1P38300 278 aa2.13□□□□□ -2.07
SMD2YLR275W RTT105P40063 208 aa2.13□□□□□ -2.07
SMD2YLR275W MRX5P47007 382 aa2.13□□□□□ -2.07
SMD2YLR275W CPD1P53314 239 aa2.13□□□□□ -2.07
SMD2YLR275W YML018CQ03730 393 aa2.13□□□□□ -2.07
SMD2YLR275W YOR114WQ12219 294 aa2.13□□□□□ -2.07
SMD2YLR275W HIS3P06633 220 aa2.12□□□□□ -2.07
SMD2YLR275W SUA5P32579 426 aa2.12□□□□□ -2.07
SMD2YLR275W SEN34P39707 275 aa2.12□□□□□ -2.07
SMD2YLR275W MEP1P40260 492 aa2.12□□□□□ -2.07
SMD2YLR275W AVT7P40501 490 aa2.12□□□□□ -2.07
SMD2YLR275W EMC2P47133 292 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 6.3 ms