RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SSY1Q03770 852 aa8.87□□□□□ -0.99
SHH4YLR164W CTS2Q06350 511 aa8.87□□□□□ -0.99
SHH4YLR164W LYS21Q12122 440 aaKnown RBP8.87□□□□□ -0.99
SHH4YLR164W YGL041W-AP0C5N3 154 aa8.86□□□□□ -0.99
SHH4YLR164W HMG1P12683 1054 aa8.86□□□□□ -0.99
SHH4YLR164W PDX1P16451 410 aa8.86□□□□□ -0.99
SHH4YLR164W YBR137WP38276 179 aa8.86□□□□□ -0.99
SHH4YLR164W SEC24P40482 926 aaKnown RBP8.86□□□□□ -0.99
SHH4YLR164W MNN5P46982 586 aa8.86□□□□□ -0.99
SHH4YLR164W APM1Q00776 475 aaPredicted RBP8.86□□□□□ -0.99
SHH4YLR164W ASR1Q06834 288 aa8.86□□□□□ -0.99
SHH4YLR164W YOL024WQ08172 172 aa8.86□□□□□ -0.99
SHH4YLR164W RCN2Q12044 265 aa8.86□□□□□ -0.99
SHH4YLR164W TMS1Q12116 473 aa8.86□□□□□ -0.99
SHH4YLR164W Q0144Q9ZZW2 109 aa8.86□□□□□ -0.99
SHH4YLR164W SOD2P00447 233 aa8.85□□□□□ -0.99
SHH4YLR164W ADK1P07170 222 aaKnown RBP8.85□□□□□ -0.99
SHH4YLR164W PBS2P08018 668 aa8.85□□□□□ -0.99
SHH4YLR164W RPS18AP0CX55 146 aaKnown RBP8.85□□□□□ -0.99
SHH4YLR164W RPS18BP0CX56 146 aaPredicted RBP8.85□□□□□ -0.99
SHH4YLR164W AHC2P25649 128 aa8.85□□□□□ -0.99
SHH4YLR164W DOA4P32571 926 aa8.85□□□□□ -0.99
SHH4YLR164W NPL6P32832 435 aa8.85□□□□□ -0.99
SHH4YLR164W RPC34P32910 317 aa8.85□□□□□ -0.99
SHH4YLR164W VPS17P32913 551 aa8.85□□□□□ -0.99
SHH4YLR164W ANR2P36090 516 aaPredicted RBP8.85□□□□□ -0.99
SHH4YLR164W YER184CP39961 794 aa8.85□□□□□ -0.99
SHH4YLR164W PMT5P52867 743 aa8.85□□□□□ -0.99
SHH4YLR164W YNR040WP53736 256 aa8.85□□□□□ -0.99
SHH4YLR164W NIP7Q08962 181 aaKnown RBP8.85□□□□□ -0.99
SHH4YLR164W TOR1P35169 2470 aa8.85□□□□□ -0.99
SHH4YLR164W COX9P07255 59 aa8.84□□□□□ -0.99
SHH4YLR164W PHO4P07270 312 aaKnown RBP8.84□□□□□ -0.99
SHH4YLR164W MRP1P10662 321 aaKnown RBP8.84□□□□□ -0.99
SHH4YLR164W UTR1P21373 530 aa8.84□□□□□ -0.99
SHH4YLR164W CAM1P29547 415 aaKnown RBP8.84□□□□□ -0.99
SHH4YLR164W SOF1P33750 489 aaKnown RBP8.84□□□□□ -0.99
SHH4YLR164W FCY21P40039 528 aa8.84□□□□□ -0.99
SHH4YLR164W ADO1P47143 340 aaKnown RBP8.84□□□□□ -0.99
SHH4YLR164W DOC1P53068 250 aa8.84□□□□□ -0.99
SHH4YLR164W KAP120Q02932 1032 aa8.84□□□□□ -0.99
SHH4YLR164W MRP51Q02950 344 aa8.84□□□□□ -0.99
SHH4YLR164W PLB2Q03674 706 aa8.84□□□□□ -0.99
SHH4YLR164W MRX8Q05473 314 aa8.84□□□□□ -0.99
SHH4YLR164W YLR352WQ06479 807 aa8.84□□□□□ -0.99
SHH4YLR164W MCH4Q08268 501 aa8.84□□□□□ -0.99
SHH4YLR164W ATG41Q12048 136 aa8.84□□□□□ -0.99
SHH4YLR164W RPP2BP02400 110 aaKnown RBP8.83□□□□□ -1
SHH4YLR164W HIS3P06633 220 aa8.83□□□□□ -1
SHH4YLR164W DBF2P22204 572 aa8.83□□□□□ -1
SHH4YLR164W PTC6P25646 442 aa8.83□□□□□ -1
SHH4YLR164W ERG9P29704 444 aa8.83□□□□□ -1
SHH4YLR164W ERG24P32462 438 aaKnown RBP8.83□□□□□ -1
SHH4YLR164W MTH1P35198 433 aa8.83□□□□□ -1
SHH4YLR164W SRP102P36057 244 aaPredicted RBP8.83□□□□□ -1
SHH4YLR164W MTC6P38849 526 aa8.83□□□□□ -1
SHH4YLR164W SLS1P42900 643 aa8.83□□□□□ -1
SHH4YLR164W IMD3P50095 523 aaKnown RBP8.83□□□□□ -1
SHH4YLR164W AIM36Q03798 255 aa8.83□□□□□ -1
SHH4YLR164W YDR514CQ04408 483 aa8.83□□□□□ -1
SHH4YLR164W BAG7Q12128 409 aa8.83□□□□□ -1
SHH4YLR164W RPL7AP05737 244 aaKnown RBP8.82□□□□□ -1
SHH4YLR164W MEK1P24719 497 aaPredicted RBP8.82□□□□□ -1
SHH4YLR164W ZUO1P32527 433 aaKnown RBP8.82□□□□□ -1
SHH4YLR164W PAU2P32612 120 aa8.82□□□□□ -1
SHH4YLR164W TMA19P35691 167 aaKnown RBP8.82□□□□□ -1
SHH4YLR164W SDS24P38314 527 aa8.82□□□□□ -1
SHH4YLR164W SER2P42941 309 aa8.82□□□□□ -1
SHH4YLR164W ATG18P43601 500 aa8.82□□□□□ -1
SHH4YLR164W CCC1P47818 322 aa8.82□□□□□ -1
SHH4YLR164W HSV2P50079 448 aaPredicted RBP8.82□□□□□ -1
SHH4YLR164W YIP4P53093 235 aa8.82□□□□□ -1
SHH4YLR164W CIK1Q01649 594 aa8.82□□□□□ -1
SHH4YLR164W COQ11Q05892 277 aa8.82□□□□□ -1
SHH4YLR164W GPN3Q06543 272 aa8.82□□□□□ -1
SHH4YLR164W SYC1Q08553 188 aaPredicted RBP8.82□□□□□ -1
SHH4YLR164W YPL272CQ08984 517 aa8.82□□□□□ -1
SHH4YLR164W RPL7BQ12213 244 aaKnown RBP8.82□□□□□ -1
SHH4YLR164W SUS1Q6WNK7 96 aa8.82□□□□□ -1
SHH4YLR164W GCN4P03069 281 aa8.81□□□□□ -1
SHH4YLR164W CDC31P06704 161 aaKnown RBP8.81□□□□□ -1
SHH4YLR164W MKS1P34072 584 aa8.81□□□□□ -1
SHH4YLR164W SHE2P36068 246 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
SHH4YLR164W CCZ1P38273 704 aa8.81□□□□□ -1
SHH4YLR164W MGE1P38523 228 aa8.81□□□□□ -1
SHH4YLR164W IPI1P38803 334 aaPredicted RBP8.81□□□□□ -1
SHH4YLR164W YGL204CP53089 101 aa8.81□□□□□ -1
SHH4YLR164W PCP1P53259 346 aa8.81□□□□□ -1
SHH4YLR164W ERV29P53337 310 aa8.81□□□□□ -1
SHH4YLR164W YMR265CQ03508 461 aaKnown RBP8.81□□□□□ -1
SHH4YLR164W GAS2Q06135 555 aa8.81□□□□□ -1
SHH4YLR164W HEM25Q07534 307 aa8.81□□□□□ -1
SHH4YLR164W YBL113CQ7M4S9 792 aa8.81□□□□□ -1
SHH4YLR164W CBP6P07253 162 aaPredicted RBP8.8□□□□□ -1
SHH4YLR164W KRR1P25586 316 aaPredicted RBP8.8□□□□□ -1
SHH4YLR164W SPT14P32363 452 aa8.8□□□□□ -1
SHH4YLR164W SPT10P35208 640 aa8.8□□□□□ -1
SHH4YLR164W MBA1P38300 278 aa8.8□□□□□ -1
SHH4YLR164W TIR3P40552 269 aa8.8□□□□□ -1
SHH4YLR164W RPA14P50106 137 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms