RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLF1YLR117C PCL7P40186 285 aa4.43□□□□□ -1.7
CLF1YLR117C FMC1P40491 155 aa4.43□□□□□ -1.7
CLF1YLR117C FIS1P40515 155 aa4.43□□□□□ -1.7
CLF1YLR117C EMC5P40540 141 aa4.43□□□□□ -1.7
CLF1YLR117C FKH2P41813 862 aa4.43□□□□□ -1.7
CLF1YLR117C PFS2P42841 465 aaKnown RBP4.43□□□□□ -1.7
CLF1YLR117C RRT5P43607 289 aa4.43□□□□□ -1.7
CLF1YLR117C GWT1P47026 490 aa4.43□□□□□ -1.7
CLF1YLR117C OST3P48439 350 aa4.43□□□□□ -1.7
CLF1YLR117C MDM34P53083 459 aa4.43□□□□□ -1.7
CLF1YLR117C VPS73P53142 486 aaKnown RBP4.43□□□□□ -1.7
CLF1YLR117C PUS6P53294 404 aa4.43□□□□□ -1.7
CLF1YLR117C YNR066CP53752 436 aa4.43□□□□□ -1.7
CLF1YLR117C TRM44Q02648 567 aaKnown RBP4.43□□□□□ -1.7
CLF1YLR117C VPS28Q02767 242 aa4.43□□□□□ -1.7
CLF1YLR117C ARG7Q04728 441 aa4.43□□□□□ -1.7
CLF1YLR117C TEN1Q07921 160 aa4.43□□□□□ -1.7
CLF1YLR117C RRG1Q12167 365 aaPredicted RBP4.43□□□□□ -1.7
CLF1YLR117C TIR4Q12218 487 aaPredicted RBP4.43□□□□□ -1.7
CLF1YLR117C VAM3Q12241 283 aa4.43□□□□□ -1.7
CLF1YLR117C TY1A-NL1Q12391 440 aaKnown RBP4.43□□□□□ -1.7
CLF1YLR117C YJR112W-AQ3E743 109 aa4.43□□□□□ -1.7
CLF1YLR117C COX2P00410 251 aa4.42□□□□□ -1.7
CLF1YLR117C UNG1P12887 359 aa4.42□□□□□ -1.7
CLF1YLR117C HOP1P20050 605 aa4.42□□□□□ -1.7
CLF1YLR117C PPH21P23594 369 aa4.42□□□□□ -1.7
CLF1YLR117C PRE8P23639 250 aa4.42□□□□□ -1.7
CLF1YLR117C YBR220CP38318 560 aa4.42□□□□□ -1.7
CLF1YLR117C SFB3P38810 929 aa4.42□□□□□ -1.7
CLF1YLR117C YIR007WP40566 764 aa4.42□□□□□ -1.7
CLF1YLR117C YGL204CP53089 101 aa4.42□□□□□ -1.7
CLF1YLR117C BUD17P53727 317 aa4.42□□□□□ -1.7
CLF1YLR117C IGO1P53897 168 aa4.42□□□□□ -1.7
CLF1YLR117C SKY1Q03656 742 aa4.42□□□□□ -1.7
CLF1YLR117C EKI1Q03764 534 aa4.42□□□□□ -1.7
CLF1YLR117C NAT4Q04751 285 aa4.42□□□□□ -1.7
CLF1YLR117C HRD3Q05787 833 aa4.42□□□□□ -1.7
CLF1YLR117C YLR225CQ05948 407 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C YLR346CQ06139 101 aa4.42□□□□□ -1.7
CLF1YLR117C PUN1Q06991 263 aa4.42□□□□□ -1.7
CLF1YLR117C ACK1Q07622 623 aaPredicted RBP4.42□□□□□ -1.7
CLF1YLR117C MMT2Q08970 484 aa4.42□□□□□ -1.7
CLF1YLR117C YDL176WQ12027 708 aa4.42□□□□□ -1.7
CLF1YLR117C FRE6Q12473 712 aa4.42□□□□□ -1.7
CLF1YLR117C RAS2P01120 322 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C GAL4P04386 881 aa4.42□□□□□ -1.7
CLF1YLR117C SWI5P08153 709 aa4.42□□□□□ -1.7
CLF1YLR117C SRM1P21827 482 aa4.42□□□□□ -1.7
CLF1YLR117C PBN1P25580 416 aa4.42□□□□□ -1.7
CLF1YLR117C YIH1P25637 258 aa4.42□□□□□ -1.7
CLF1YLR117C MET22P32179 357 aa4.42□□□□□ -1.7
CLF1YLR117C AIM26P32858 118 aa4.42□□□□□ -1.7
CLF1YLR117C TRS65P32893 560 aa4.42□□□□□ -1.7
CLF1YLR117C SHE2P36068 246 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
CLF1YLR117C FUI1P38196 639 aa4.42□□□□□ -1.7
CLF1YLR117C FIG1P38224 298 aa4.42□□□□□ -1.7
CLF1YLR117C YBR197CP38306 217 aa4.42□□□□□ -1.7
CLF1YLR117C SRP68P38687 599 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C SKN7P38889 622 aa4.42□□□□□ -1.7
CLF1YLR117C YER188WP40103 239 aa4.42□□□□□ -1.7
CLF1YLR117C YIL152WP40455 235 aa4.42□□□□□ -1.7
CLF1YLR117C SYS1P41544 203 aa4.42□□□□□ -1.7
CLF1YLR117C CAT5P41735 233 aa4.42□□□□□ -1.7
CLF1YLR117C ALK1P43633 760 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C TRM9P49957 279 aa4.42□□□□□ -1.7
CLF1YLR117C YNL134CP53912 376 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C CDC14Q00684 551 aa4.42□□□□□ -1.7
CLF1YLR117C YDR415CQ04033 374 aaPredicted RBP4.42□□□□□ -1.7
CLF1YLR117C GMC1Q04399 608 aa4.42□□□□□ -1.7
CLF1YLR117C YML096WQ04489 525 aa4.42□□□□□ -1.7
CLF1YLR117C GIM5Q04493 163 aa4.42□□□□□ -1.7
CLF1YLR117C YMR315WQ04869 349 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C YPR027CQ12079 277 aa4.42□□□□□ -1.7
CLF1YLR117C LEU9Q12166 604 aaKnown RBP4.42□□□□□ -1.7
CLF1YLR117C TPO4Q12256 659 aa4.42□□□□□ -1.7
CLF1YLR117C ERP3Q12403 225 aa4.42□□□□□ -1.7
CLF1YLR117C SNF8Q12483 233 aa4.42□□□□□ -1.7
CLF1YLR117C WIP1Q2V2P8 89 aa4.42□□□□□ -1.7
CLF1YLR117C RPS31P05759 152 aaKnown RBP4.41□□□□□ -1.7
CLF1YLR117C UBI4P0CG63 381 aaKnown RBP4.41□□□□□ -1.7
CLF1YLR117C RPL40AP0CH08 128 aaKnown RBP4.41□□□□□ -1.7
CLF1YLR117C RPL40BP0CH09 128 aaKnown RBP4.41□□□□□ -1.7
CLF1YLR117C RER1P25560 188 aa4.41□□□□□ -1.7
CLF1YLR117C PHO11P35842 467 aa4.41□□□□□ -1.7
CLF1YLR117C PHO12P38693 467 aa4.41□□□□□ -1.7
CLF1YLR117C LRO1P40345 661 aa4.41□□□□□ -1.7
CLF1YLR117C POP1P41812 875 aa4.41□□□□□ -1.7
CLF1YLR117C YDR248CQ03786 193 aa4.41□□□□□ -1.7
CLF1YLR117C AVO2Q04749 426 aa4.41□□□□□ -1.7
CLF1YLR117C RNH202Q05635 350 aa4.41□□□□□ -1.7
CLF1YLR117C PIN3Q06449 215 aa4.41□□□□□ -1.7
CLF1YLR117C HEM25Q07534 307 aa4.41□□□□□ -1.7
CLF1YLR117C YTM1Q12024 460 aaPredicted RBP4.41□□□□□ -1.7
CLF1YLR117C YLR099W-AQ3E798 87 aa4.41□□□□□ -1.7
CLF1YLR117C RIP1P08067 215 aa4.41□□□□□ -1.7
CLF1YLR117C SCL1P21243 252 aaKnown RBP4.41□□□□□ -1.7
CLF1YLR117C BUD5P25300 642 aaPredicted RBP4.41□□□□□ -1.7
CLF1YLR117C TGL1P34163 548 aa4.41□□□□□ -1.7
CLF1YLR117C AXL2P38928 823 aa4.41□□□□□ -1.7
CLF1YLR117C PRP39P39682 629 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms