RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	MRPL8	P22353	238 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	AME1	P38313	324 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	YER121W	P40076	114 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	AGP3	P43548	558 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	HOC1	P47124	396 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	TOS2	P50078	622 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	BNS1	P50084	137 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	YIP3	P53633	176 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	ZRG17	P53735	605 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	ALG11	P53954	548 aa	Known RBP	2.43	□□□□□ -2.02
VHR1	YIL056W	VPS60	Q03390	229 aa		2.43	□□□□□ -2.02
VHR1	YIL056W	YDR157W	A0A023PZE8	133 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	COX4	P04037	155 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	MRP1	P10662	321 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	RFA3	P26755	122 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	VMA5	P31412	392 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	TPS2	P31688	896 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	VAM7	P32912	316 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	MRPS5	P33759	307 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	VPS21	P36017	210 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	GPX2	P38143	162 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	OM14	P38325	134 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	TIM17	P39515	158 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	SOP4	P39543	234 aa	Predicted RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	THO1	P40040	218 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	AGE2	P40529	298 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	NAS6	P50086	228 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	SEH1	P53011	349 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	OKP1	P53298	406 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	MRPS16	Q02608	121 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	CTF19	Q02732	369 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	EBS1	Q03466	884 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	NAT4	Q04751	285 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	YDL144C	Q07589	356 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	SAM4	Q08985	325 aa	Known RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	ATP6	P00854	259 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	FAR1	P21268	830 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.42	□□□□□ -2.02	not detected
VHR1	YIL056W	SSO1	P32867	290 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	RFT1	P38206	574 aa	Predicted RBP	2.42	□□□□□ -2.02
VHR1	YIL056W	FIG1	P38224	298 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	POG1	P40473	351 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	ICE2	P40499	491 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	YKE4	P40544	346 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	IGD1	P43598	195 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	PEX12	Q04370	399 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	YPQ1	Q12010	308 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	APC9	Q12107	265 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	TUS1	Q06412	1307 aa		2.42	□□□□□ -2.02
VHR1	YIL056W	QCR2	P07257	368 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	GIT1	P25346	518 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	NUF2	P33895	451 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	DBP7	P36120	742 aa	Known RBP	2.41	□□□□□ -2.02
VHR1	YIL056W	MRX3	P38172	270 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	FZO1	P38297	855 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	COX15	P40086	486 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	DDI1	P40087	428 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	YER186C	P40101	306 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	SED5	Q01590	340 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	YDC1	Q02896	317 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	YDL114W	Q07530	308 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	MFG1	Q07684	458 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	CSM4	Q08955	156 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	YDL199C	Q12407	687 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	ECM5	Q03214	1411 aa		2.41	□□□□□ -2.02
VHR1	YIL056W	HIS1	P00498	297 aa	Known RBP	2.4	□□□□□ -2.02
VHR1	YIL056W	TOA2	P32774	122 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	CDC13	P32797	924 aa	Known RBP	2.4	□□□□□ -2.02
VHR1	YIL056W	SWD2	P36104	329 aa	Predicted RBP	2.4	□□□□□ -2.02
VHR1	YIL056W	SOL2	P37262	315 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	PRS2	P38620	318 aa	Known RBP	2.4	□□□□□ -2.02
VHR1	YIL056W	ATG7	P38862	630 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	YJR149W	P47177	404 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	NIF3	P53081	288 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	YPL080C	Q02826	108 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	PEX10	Q05568	337 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	ASR1	Q06834	288 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	PBP4	Q07362	185 aa	Known RBP	2.4	□□□□□ -2.02
VHR1	YIL056W	PER33	Q12144	273 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	ERP3	Q12403	225 aa		2.4	□□□□□ -2.02
VHR1	YIL056W	LSO2	Q3E772	92 aa	Known RBP	2.4	□□□□□ -2.02
VHR1	YIL056W	RPS24A	P0CX31	135 aa	Known RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	RPS24B	P0CX32	135 aa	Known RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	SNA3	P14359	133 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	PRX1	P34227	261 aa	Known RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	SRP102	P36057	244 aa	Predicted RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	IST2	P38250	946 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	RCK2	P38623	610 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	TRM5	P38793	499 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	IKI1	P38874	309 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	NPT1	P39683	429 aa	Known RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	VAB2	P40003	282 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	RSM25	P40496	264 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	YFL040W	P43562	540 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	JHD2	P47156	728 aa	Predicted RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	YJR141W	P47172	347 aa	Predicted RBP	2.4	□□□□□ -2.03
VHR1	YIL056W	YGL262W	P53054	175 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	YNL140C	P53910	189 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	TSA2	Q04120	196 aa		2.4	□□□□□ -2.03
VHR1	YIL056W	YPR147C	Q06522	304 aa	Known RBP	2.4	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms