RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	AME1	P38313	324 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	PHO89	P38361	574 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	VPS52	P39904	641 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	BUR6	P40096	142 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	GAB1	P41733	394 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	PRM10	P42946	383 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	CAK1	P43568	368 aa	Predicted RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	DPB11	P47027	764 aa	Predicted RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	AIM22	P47051	409 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	YJR011C	P47086	261 aa	Predicted RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	YJR012C	P47087	207 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	YJR111C	P47148	283 aa	Known RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	AZR1	P50080	613 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	GLO1	P50107	326 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	ERG13	P54839	491 aa	Known RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	REG1	Q00816	1014 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	SPR6	Q01684	191 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	TRM44	Q02648	567 aa	Known RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	MAK3	Q03503	176 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	YDR124W	Q04608	324 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	CRF1	Q04930	467 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	MSC3	Q05812	728 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	RIF2	Q06208	395 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	CTS2	Q06350	511 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	YLR413W	Q06689	675 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	SDO1	Q07953	250 aa	Known RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	HRD1	Q08109	551 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	NMD4	Q12129	218 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	YPL245W	Q12179	454 aa	Known RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	YDR018C	Q12185	396 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	YDL199C	Q12407	687 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	MRX4	Q12467	430 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	PFK27	Q12471	397 aa	Predicted RBP	3.13	□□□□□ -1.91
ECO1	YFR027W	SFG1	Q12507	346 aa		3.13	□□□□□ -1.91
ECO1	YFR027W	RPL9A	P05738	191 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
ECO1	YFR027W	SGA1	P08019	549 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	NHP6B	P11633	99 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	HAP3	P13434	144 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
ECO1	YFR027W	PDA1	P16387	420 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	EST1	P17214	699 aa	Predicted RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	DAL82	P21705	255 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	MAG1	P22134	296 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	PUP3	P25451	205 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	EHD3	P28817	500 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	SUA7	P29055	345 aa	Predicted RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	EMP24	P32803	203 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	MSN4	P33749	630 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	CSG2	P35206	410 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YKL075C	P36083	450 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	ATG8	P38182	117 aa	RIP-Chip data	3.12	□□□□□ -1.91	not detected
ECO1	YFR027W	SHE3	P38272	425 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	DBP8	P38719	431 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	ISC1	P40015	477 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	FAU1	P40099	211 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	GAT2	P40209	560 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YJL218W	P40892	196 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	QRI7	P43122	407 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	MCM22	P47167	239 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YJR149W	P47177	404 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	PHB2	P50085	310 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	RPL9B	P51401	191 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	YGL185C	P53100	379 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	ROG1	P53118	685 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	COG7	P53195	279 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	ERV29	P53337	310 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	MPA43	P53583	542 aa	Predicted RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	AAT1	Q01802	451 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	RSM10	Q03201	203 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YDR248C	Q03786	193 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	TRM12	Q04235	462 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YML096W	Q04489	525 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YMR034C	Q05131	434 aa	Predicted RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	TPO3	Q06451	622 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	YOR365C	Q08844	703 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	POM33	Q12164	279 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	LEU9	Q12166	604 aa	Known RBP	3.12	□□□□□ -1.91
ECO1	YFR027W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
ECO1	YFR027W	RGT2	Q12300	763 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	WIP1	Q2V2P8	89 aa		3.12	□□□□□ -1.91
ECO1	YFR027W	THP2	O13539	261 aa	Known RBP	3.11	□□□□□ -1.91
ECO1	YFR027W	COX5B	P00425	151 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	CBP1	P07252	654 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	CDC33	P07260	213 aa	Known RBP	3.11	□□□□□ -1.91
ECO1	YFR027W	DDI2	P0CH63	225 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	DDI3	P0CH64	225 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	CPR1	P14832	162 aa	Known RBP	3.11	□□□□□ -1.91
ECO1	YFR027W	ERD1	P16151	362 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	PDE1	P22434	369 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	MAK31	P23059	88 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	EXG1	P23776	448 aa	Known RBP	3.11	□□□□□ -1.91
ECO1	YFR027W	BOS1	P25385	244 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	GEX1	P25596	615 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	RIM1	P32445	135 aa	Known RBP	3.11	□□□□□ -1.91
ECO1	YFR027W	ERG1	P32476	496 aa	Known RBP	3.11	□□□□□ -1.91
ECO1	YFR027W	CLB6	P32943	380 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	YCR087C-A	P37263	153 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	SDH4	P37298	181 aa		3.11	□□□□□ -1.91
ECO1	YFR027W	DTR1	P38125	572 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms