RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A SEC16P48415 2195 aaKnown RBP8.08□□□□□ -1.12
LSB3YFR024C-A RPL35AP0CX84 120 aaKnown RBP8.08□□□□□ -1.12
LSB3YFR024C-A RPL35BP0CX85 120 aaKnown RBP8.08□□□□□ -1.12
LSB3YFR024C-A CPR2P23285 205 aa8.08□□□□□ -1.12
LSB3YFR024C-A KRR1P25586 316 aaPredicted RBP8.08□□□□□ -1.12
LSB3YFR024C-A YBR063CP38083 404 aa8.08□□□□□ -1.12
LSB3YFR024C-A MDM31P38880 579 aa8.08□□□□□ -1.12
LSB3YFR024C-A YER084WP40057 128 aa8.08□□□□□ -1.12
LSB3YFR024C-A PDS1P40316 373 aaPredicted RBP8.08□□□□□ -1.12
LSB3YFR024C-A MSS2P40990 351 aa8.08□□□□□ -1.12
LSB3YFR024C-A SIP18P50263 79 aa8.08□□□□□ -1.12
LSB3YFR024C-A GRX5Q02784 150 aa8.08□□□□□ -1.12
LSB3YFR024C-A FIN1Q03898 291 aa8.08□□□□□ -1.12
LSB3YFR024C-A IPK1Q06667 281 aa8.08□□□□□ -1.12
LSB3YFR024C-A AIM6Q07716 390 aa8.08□□□□□ -1.12
LSB3YFR024C-A IZH2Q12442 317 aa8.08□□□□□ -1.12
LSB3YFR024C-A RRI1Q12468 440 aa8.08□□□□□ -1.12
LSB3YFR024C-A MED11Q99278 115 aa8.08□□□□□ -1.12
LSB3YFR024C-A YGL041W-AP0C5N3 154 aa8.07□□□□□ -1.12
LSB3YFR024C-A FPS1P23900 669 aa8.07□□□□□ -1.12
LSB3YFR024C-A SED4P25365 1065 aa8.07□□□□□ -1.12
LSB3YFR024C-A FUN19P28003 413 aaPredicted RBP8.07□□□□□ -1.12
LSB3YFR024C-A NDC1P32500 655 aa8.07□□□□□ -1.12
LSB3YFR024C-A ECT1P33412 323 aa8.07□□□□□ -1.12
LSB3YFR024C-A MRPS5P33759 307 aa8.07□□□□□ -1.12
LSB3YFR024C-A SSZ1P38788 538 aaKnown RBP8.07□□□□□ -1.12
LSB3YFR024C-A IPT1P38954 527 aa8.07□□□□□ -1.12
LSB3YFR024C-A GVP36P40531 326 aaKnown RBP8.07□□□□□ -1.12
LSB3YFR024C-A VOA1P53262 265 aa8.07□□□□□ -1.12
LSB3YFR024C-A NNT1Q05874 261 aa8.07□□□□□ -1.12
LSB3YFR024C-A NCE102Q12207 173 aaRIP-Chip data8.07□□□□□ -1.12not detected
LSB3YFR024C-A YGK3Q12222 375 aaPredicted RBP8.07□□□□□ -1.12
LSB3YFR024C-A TRM10Q12400 293 aa8.07□□□□□ -1.12
LSB3YFR024C-A SCEIP03882 235 aa8.06□□□□□ -1.12
LSB3YFR024C-A RPS13P05756 151 aaKnown RBP8.06□□□□□ -1.12
LSB3YFR024C-A TIF3P34167 436 aaKnown RBP8.06□□□□□ -1.12
LSB3YFR024C-A MED8P38304 223 aa8.06□□□□□ -1.12
LSB3YFR024C-A AIM10P39965 576 aaKnown RBP8.06□□□□□ -1.12
LSB3YFR024C-A NTA1P40354 457 aa8.06□□□□□ -1.12
LSB3YFR024C-A TNA1P53322 534 aa8.06□□□□□ -1.12
LSB3YFR024C-A AIM36Q03798 255 aa8.06□□□□□ -1.12
LSB3YFR024C-A MRX8Q05473 314 aa8.06□□□□□ -1.12
LSB3YFR024C-A RTN2Q12443 393 aa8.06□□□□□ -1.12
LSB3YFR024C-A KIN28P06242 306 aa8.05□□□□□ -1.12
LSB3YFR024C-A STE18P18852 110 aa8.05□□□□□ -1.12
LSB3YFR024C-A CLB2P24869 491 aa8.05□□□□□ -1.12
LSB3YFR024C-A RPC34P32910 317 aa8.05□□□□□ -1.12
LSB3YFR024C-A ECM4P36156 370 aa8.05□□□□□ -1.12
LSB3YFR024C-A YPK3P38070 525 aa8.05□□□□□ -1.12
LSB3YFR024C-A YBR220CP38318 560 aa8.05□□□□□ -1.12
LSB3YFR024C-A BUR6P40096 142 aa8.05□□□□□ -1.12
LSB3YFR024C-A NOG1Q02892 647 aaKnown RBP8.05□□□□□ -1.12
LSB3YFR024C-A YCL042WP25572 119 aa8.04□□□□□ -1.12
LSB3YFR024C-A BAP2P38084 609 aa8.04□□□□□ -1.12
LSB3YFR024C-A DTR1P38125 572 aa8.04□□□□□ -1.12
LSB3YFR024C-A SHE1P38200 338 aa8.04□□□□□ -1.12
LSB3YFR024C-A SDP1P40479 209 aa8.04□□□□□ -1.12
LSB3YFR024C-A PFS2P42841 465 aaKnown RBP8.04□□□□□ -1.12
LSB3YFR024C-A MCT1Q12283 360 aa8.04□□□□□ -1.12
LSB3YFR024C-A DBF2P22204 572 aa8.03□□□□□ -1.12
LSB3YFR024C-A ERG4P25340 473 aa8.03□□□□□ -1.12
LSB3YFR024C-A QDR1P40475 563 aa8.03□□□□□ -1.12
LSB3YFR024C-A YJL055WP47044 245 aa8.03□□□□□ -1.12
LSB3YFR024C-A RMD9P53140 646 aaKnown RBP8.03□□□□□ -1.12
LSB3YFR024C-A DIG2Q03373 323 aaKnown RBP8.03□□□□□ -1.12
LSB3YFR024C-A YLR346CQ06139 101 aa8.03□□□□□ -1.12
LSB3YFR024C-A YLR173WQ06247 608 aa8.03□□□□□ -1.12
LSB3YFR024C-A GSH2Q08220 491 aa8.03□□□□□ -1.12
LSB3YFR024C-A THI72Q08579 599 aa8.03□□□□□ -1.12
LSB3YFR024C-A YOR378WQ08902 515 aa8.03□□□□□ -1.12
LSB3YFR024C-A FIT3Q08907 204 aa8.03□□□□□ -1.12
LSB3YFR024C-A RKM1Q08961 583 aaPredicted RBP8.03□□□□□ -1.12
LSB3YFR024C-A THP3Q12049 470 aaKnown RBP8.03□□□□□ -1.12
LSB3YFR024C-A TY1A-BLQ12266 440 aa8.03□□□□□ -1.12
LSB3YFR024C-A PDA1P16387 420 aaKnown RBP8.02□□□□□ -1.13
LSB3YFR024C-A MDH1P17505 334 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
LSB3YFR024C-A MEK1P24719 497 aaPredicted RBP8.02□□□□□ -1.13
LSB3YFR024C-A MIA40P36046 403 aa8.02□□□□□ -1.13
LSB3YFR024C-A APL3P38065 1025 aa8.02□□□□□ -1.13
LSB3YFR024C-A PIG2P40187 538 aa8.02□□□□□ -1.13
LSB3YFR024C-A LOH1P47055 219 aa8.02□□□□□ -1.13
LSB3YFR024C-A MTM1P53320 366 aa8.02□□□□□ -1.13
LSB3YFR024C-A SAY1P53324 424 aa8.02□□□□□ -1.13
LSB3YFR024C-A ASI3P53983 676 aa8.02□□□□□ -1.13
LSB3YFR024C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
LSB3YFR024C-A PML1Q07930 204 aaPredicted RBP8.02□□□□□ -1.13
LSB3YFR024C-A RPA135P22138 1203 aaKnown RBP8.01□□□□□ -1.13
LSB3YFR024C-A PUT3P25502 979 aaPredicted RBP8.01□□□□□ -1.13
LSB3YFR024C-A CLB6P32943 380 aa8.01□□□□□ -1.13
LSB3YFR024C-A CLG1P35190 452 aa8.01□□□□□ -1.13
LSB3YFR024C-A SDS22P36047 338 aa8.01□□□□□ -1.13
LSB3YFR024C-A CCC1P47818 322 aa8.01□□□□□ -1.13
LSB3YFR024C-A SAM50P53969 484 aa8.01□□□□□ -1.13
LSB3YFR024C-A RSM23Q01163 450 aa8.01□□□□□ -1.13
LSB3YFR024C-A NOP56Q12460 504 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
LSB3YFR024C-A PDE2P06776 526 aa8□□□□□ -1.13
LSB3YFR024C-A NAM2P11325 894 aa8□□□□□ -1.13
LSB3YFR024C-A ENA1P13587 1091 aa8□□□□□ -1.13
LSB3YFR024C-A DBF20P32328 564 aa8□□□□□ -1.13
LSB3YFR024C-A PUB1P32588 453 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms