RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C YDL211CQ12121 372 aa3.32□□□□□ -1.88
OTU1YFL044C YOR214CQ12282 236 aa3.32□□□□□ -1.88
OTU1YFL044C YKL018C-AQ3E7A7 99 aa3.32□□□□□ -1.88
OTU1YFL044C CAR1P00812 333 aaKnown RBP3.31□□□□□ -1.88
OTU1YFL044C PUT2P07275 575 aa3.31□□□□□ -1.88
OTU1YFL044C ZWF1P11412 505 aaKnown RBP3.31□□□□□ -1.88
OTU1YFL044C UNG1P12887 359 aa3.31□□□□□ -1.88
OTU1YFL044C MDH2P22133 377 aa3.31□□□□□ -1.88
OTU1YFL044C MRPS5P33759 307 aa3.31□□□□□ -1.88
OTU1YFL044C ARN2P38724 620 aa3.31□□□□□ -1.88
OTU1YFL044C VPS41P38959 992 aa3.31□□□□□ -1.88
OTU1YFL044C CIN4P39110 191 aa3.31□□□□□ -1.88
OTU1YFL044C SHO1P40073 367 aa3.31□□□□□ -1.88
OTU1YFL044C PRE6P40303 254 aaKnown RBP3.31□□□□□ -1.88
OTU1YFL044C GDS1P41913 522 aa3.31□□□□□ -1.88
OTU1YFL044C YFL051CP43552 160 aa3.31□□□□□ -1.88
OTU1YFL044C MDE1P47095 244 aa3.31□□□□□ -1.88
OTU1YFL044C GPI8P49018 411 aa3.31□□□□□ -1.88
OTU1YFL044C DBP6P53734 629 aaKnown RBP3.31□□□□□ -1.88
OTU1YFL044C INP1Q03694 420 aa3.31□□□□□ -1.88
OTU1YFL044C EKI1Q03764 534 aa3.31□□□□□ -1.88
OTU1YFL044C NAT4Q04751 285 aa3.31□□□□□ -1.88
OTU1YFL044C SLF1Q12034 447 aaKnown RBP3.31□□□□□ -1.88
OTU1YFL044C MCP1Q12106 302 aa3.31□□□□□ -1.88
OTU1YFL044C NCA2Q12374 616 aa3.31□□□□□ -1.88
OTU1YFL044C DET1Q99288 334 aaKnown RBP3.31□□□□□ -1.88
OTU1YFL044C STF1P01098 86 aa3.3□□□□□ -1.88
OTU1YFL044C RPL15AP05748 204 aaKnown RBP3.3□□□□□ -1.88
OTU1YFL044C RHO1P06780 209 aaKnown RBP3.3□□□□□ -1.88
OTU1YFL044C CTA1P15202 515 aa3.3□□□□□ -1.88
OTU1YFL044C BUD5P25300 642 aaPredicted RBP3.3□□□□□ -1.88
OTU1YFL044C SAC1P32368 623 aaKnown RBP3.3□□□□□ -1.88
OTU1YFL044C RPN2P32565 945 aaKnown RBP3.3□□□□□ -1.88
OTU1YFL044C LTV1P34078 463 aa3.3□□□□□ -1.88
OTU1YFL044C YKL187CP34231 750 aa3.3□□□□□ -1.88
OTU1YFL044C MTC6P38849 526 aa3.3□□□□□ -1.88
OTU1YFL044C COG3P40094 801 aa3.3□□□□□ -1.88
OTU1YFL044C YFR054CP43622 192 aa3.3□□□□□ -1.88
OTU1YFL044C IRC7P43623 340 aa3.3□□□□□ -1.88
OTU1YFL044C RPL15BP54780 204 aaPredicted RBP3.3□□□□□ -1.88
OTU1YFL044C MMT1Q03218 510 aa3.3□□□□□ -1.88
OTU1YFL044C ACL4Q03771 387 aa3.3□□□□□ -1.88
OTU1YFL044C SNX41Q04053 625 aa3.3□□□□□ -1.88
OTU1YFL044C RNH1Q04740 348 aa3.3□□□□□ -1.88
OTU1YFL044C YHC1Q05900 231 aaKnown RBP3.3□□□□□ -1.88
OTU1YFL044C YDL180WQ12301 547 aa3.3□□□□□ -1.88
OTU1YFL044C ARG81P05085 880 aa3.29□□□□□ -1.88
OTU1YFL044C RPS1BP23248 255 aaKnown RBP3.29□□□□□ -1.88
OTU1YFL044C RAD14P28519 371 aa3.29□□□□□ -1.88
OTU1YFL044C PTC1P35182 281 aa3.29□□□□□ -1.88
OTU1YFL044C ADH5P38113 351 aaKnown RBP3.29□□□□□ -1.88
OTU1YFL044C CHK1P38147 527 aa3.29□□□□□ -1.88
OTU1YFL044C NTC20P38302 140 aaPredicted RBP3.29□□□□□ -1.88
OTU1YFL044C MTC4P38335 694 aaKnown RBP3.29□□□□□ -1.88
OTU1YFL044C MNN9P39107 395 aaKnown RBP3.29□□□□□ -1.88
OTU1YFL044C MBB1P39534 108 aa3.29□□□□□ -1.88
OTU1YFL044C YIL012WP40551 113 aa3.29□□□□□ -1.88
OTU1YFL044C IDP2P41939 412 aa3.29□□□□□ -1.88
OTU1YFL044C YGR149WP48236 432 aa3.29□□□□□ -1.88
OTU1YFL044C TOM22P49334 152 aa3.29□□□□□ -1.88
OTU1YFL044C MRM2P53123 320 aa3.29□□□□□ -1.88
OTU1YFL044C PCP1P53259 346 aa3.29□□□□□ -1.88
OTU1YFL044C YNR068CP53754 272 aa3.29□□□□□ -1.88
OTU1YFL044C ASI1P54074 624 aa3.29□□□□□ -1.88
OTU1YFL044C REX2P54964 269 aaKnown RBP3.29□□□□□ -1.88
OTU1YFL044C SKO1Q02100 647 aa3.29□□□□□ -1.88
OTU1YFL044C HOT1Q03213 719 aa3.29□□□□□ -1.88
OTU1YFL044C GRX3Q03835 250 aa3.29□□□□□ -1.88
OTU1YFL044C SGT1Q08446 395 aa3.29□□□□□ -1.88
OTU1YFL044C RDL2Q08742 149 aaKnown RBP3.29□□□□□ -1.88
OTU1YFL044C PSY3Q12318 242 aa3.29□□□□□ -1.88
OTU1YFL044C GEP5Q12393 293 aa3.29□□□□□ -1.88
OTU1YFL044C SNF8Q12483 233 aa3.29□□□□□ -1.88
OTU1YFL044C PEP4P07267 405 aaKnown RBP3.28□□□□□ -1.88
OTU1YFL044C TFS1P14306 219 aa3.28□□□□□ -1.88
OTU1YFL044C CLB2P24869 491 aa3.28□□□□□ -1.88
OTU1YFL044C ITR1P30605 584 aa3.28□□□□□ -1.88
OTU1YFL044C AFG1P32317 509 aa3.28□□□□□ -1.88
OTU1YFL044C SWH1P35845 1188 aa3.28□□□□□ -1.88
OTU1YFL044C MRPL17P36528 281 aa3.28□□□□□ -1.88
OTU1YFL044C RRP4P38792 359 aaKnown RBP3.28□□□□□ -1.88
OTU1YFL044C YNL208WP40159 199 aaKnown RBP3.28□□□□□ -1.88
OTU1YFL044C RFC4P40339 323 aaKnown RBP3.28□□□□□ -1.88
OTU1YFL044C ATG27P46989 271 aa3.28□□□□□ -1.88
OTU1YFL044C YGR126WP53274 230 aa3.28□□□□□ -1.88
OTU1YFL044C COX20Q04935 205 aa3.28□□□□□ -1.88
OTU1YFL044C ATG26Q06321 1198 aa3.28□□□□□ -1.88
OTU1YFL044C MCH4Q08268 501 aa3.28□□□□□ -1.88
OTU1YFL044C TMC1Q08422 150 aaPredicted RBP3.28□□□□□ -1.88
OTU1YFL044C NIP7Q08962 181 aaKnown RBP3.28□□□□□ -1.88
OTU1YFL044C RPN6Q12377 434 aa3.28□□□□□ -1.88
OTU1YFL044C MHF1Q3E835 90 aa3.28□□□□□ -1.88
OTU1YFL044C SPS4P09937 338 aa3.27□□□□□ -1.89
OTU1YFL044C MER1P16523 270 aa3.27□□□□□ -1.89
OTU1YFL044C COQ3P27680 312 aa3.27□□□□□ -1.89
OTU1YFL044C DEP1P31385 405 aa3.27□□□□□ -1.89
OTU1YFL044C CYS4P32582 507 aaKnown RBP3.27□□□□□ -1.89
OTU1YFL044C RPT5P33297 434 aaKnown RBP3.27□□□□□ -1.89
OTU1YFL044C ROT2P38138 954 aa3.27□□□□□ -1.89
OTU1YFL044C YBR220CP38318 560 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms