RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	FAA2	P39518	744 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	YIL067C	P40514	678 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	SYG1	P40528	902 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	GTO1	P48239	356 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	NOP19	P53317	196 aa	Predicted RBP	3.68	□□□□□ -1.82
UBC8	YEL012W	SAM50	P53969	484 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	MSS11	Q03825	758 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	COS7	Q07788	383 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	JLP1	Q12358	412 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	PFK27	Q12471	397 aa	Predicted RBP	3.68	□□□□□ -1.82
UBC8	YEL012W	SNF8	Q12483	233 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	YKL018C-A	Q3E7A7	99 aa		3.68	□□□□□ -1.82
UBC8	YEL012W	RAS2	P01120	322 aa	Known RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	MET2	P08465	486 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	SPS4	P09937	338 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	GAL3	P13045	520 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	CBS2	P14905	389 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	ATP10	P18496	279 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	YCR007C	P25354	239 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	YCR043C	P25361	127 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	AFG1	P32317	509 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	LOS1	P33418	1100 aa	Predicted RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	MRPS5	P33759	307 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	ECM15	P35195	104 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	CAF4	P36130	643 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	ARC40	P38328	384 aa	Known RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	LIA1	P47120	325 aa	Known RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	RPS12	P48589	143 aa	Known RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	MAL13	P53338	473 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	MAL12	P53341	584 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	OGG1	P53397	376 aa	Predicted RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	REX2	P54964	269 aa	Known RBP	3.67	□□□□□ -1.82
UBC8	YEL012W	IRC15	Q02733	499 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	RPM2	Q02773	1202 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	KAP120	Q02932	1032 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	YMR010W	Q03687	405 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	YDR249C	Q03787	373 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	STE23	Q06010	1027 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	PHO92	Q06390	306 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	RAF1	Q06891	181 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	YEH2	Q07950	538 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	ISA2	Q12425	185 aa		3.67	□□□□□ -1.82
UBC8	YEL012W	MES1	P00958	751 aa	Known RBP	3.66	□□□□□ -1.82
UBC8	YEL012W	CDC36	P06100	191 aa	Predicted RBP	3.66	□□□□□ -1.82
UBC8	YEL012W	HNM1	P19807	563 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	CPR2	P23285	205 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	CYS4	P32582	507 aa	Known RBP	3.66	□□□□□ -1.82
UBC8	YEL012W	ECM34	P38728	170 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	LIN1	P38852	340 aa	Predicted RBP	3.66	□□□□□ -1.82
UBC8	YEL012W	YND1	P40009	630 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	AVT7	P40501	490 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	RCF2	P53721	224 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	YNL010W	P53981	241 aa	Known RBP	3.66	□□□□□ -1.82
UBC8	YEL012W	TVP15	Q03860	143 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	ECM11	Q04110	302 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	NAT4	Q04751	285 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	COX20	Q04935	205 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	YHC1	Q05900	231 aa	Known RBP	3.66	□□□□□ -1.82
UBC8	YEL012W	BUR2	Q05949	395 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	GEP5	Q12393	293 aa		3.66	□□□□□ -1.82
UBC8	YEL012W	CCW14	O13547	238 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	RPO26	P20435	155 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	DBR1	P24309	405 aa	Known RBP	3.65	□□□□□ -1.83
UBC8	YEL012W	RFC3	P38629	340 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	PRS3	P38689	320 aa	Known RBP	3.65	□□□□□ -1.83
UBC8	YEL012W	CAK1	P43568	368 aa	Predicted RBP	3.65	□□□□□ -1.83
UBC8	YEL012W	PAC10	P48363	199 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	TOS2	P50078	622 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	NAS6	P50086	228 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	LSG1	P53145	640 aa	Known RBP	3.65	□□□□□ -1.83
UBC8	YEL012W	PCP1	P53259	346 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	RHO5	P53879	331 aa	Known RBP	3.65	□□□□□ -1.83
UBC8	YEL012W	MRP51	Q02950	344 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	RSN1	Q03516	953 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	SNA4	Q07549	140 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	YOL131W	Q08270	108 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	DCI1	Q08558	271 aa		3.65	□□□□□ -1.83
UBC8	YEL012W	PRB1	P09232	635 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.64	□□□□□ -1.83	not detected
UBC8	YEL012W	SCO1	P23833	295 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	FUN19	P28003	413 aa	Predicted RBP	3.64	□□□□□ -1.83
UBC8	YEL012W	VPS17	P32913	551 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	YOR062C	P36025	268 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	YBR032W	P38223	100 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	MTC4	P38335	694 aa	Known RBP	3.64	□□□□□ -1.83
UBC8	YEL012W	AYR1	P40471	297 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	IDP2	P41939	412 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	ADO1	P47143	340 aa	Known RBP	3.64	□□□□□ -1.83
UBC8	YEL012W	ECM27	P47144	725 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	COS6	P53344	381 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	MNT4	P53745	580 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	SKO1	Q02100	647 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	FMN1	Q03778	218 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	SYO1	Q07395	620 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	SRL1	Q08673	210 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	RDL2	Q08742	149 aa	Known RBP	3.64	□□□□□ -1.83
UBC8	YEL012W	VAM3	Q12241	283 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	SET6	Q12529	373 aa		3.64	□□□□□ -1.83
UBC8	YEL012W	ZWF1	P11412	505 aa	Known RBP	3.63	□□□□□ -1.83
UBC8	YEL012W	KSS1	P14681	368 aa		3.63	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms