RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C YDR514CQ04408 483 aa9.53□□□□□ -0.88
VPS60YDR486C NGL1Q08213 363 aaKnown RBP9.53□□□□□ -0.88
VPS60YDR486C SOG2Q08817 791 aa9.53□□□□□ -0.88
VPS60YDR486C BAG7Q12128 409 aa9.53□□□□□ -0.88
VPS60YDR486C RPN13O13563 156 aa9.52□□□□□ -0.89
VPS60YDR486C CBP6P07253 162 aaPredicted RBP9.52□□□□□ -0.89
VPS60YDR486C MRP1P10662 321 aaKnown RBP9.52□□□□□ -0.89
VPS60YDR486C DOA4P32571 926 aa9.52□□□□□ -0.89
VPS60YDR486C RPC34P32910 317 aa9.52□□□□□ -0.89
VPS60YDR486C VPS17P32913 551 aa9.52□□□□□ -0.89
VPS60YDR486C AIM3P38266 947 aaKnown RBP9.52□□□□□ -0.89
VPS60YDR486C PEX32P38292 413 aa9.52□□□□□ -0.89
VPS60YDR486C STS1P38637 319 aa9.52□□□□□ -0.89
VPS60YDR486C ASI3P53983 676 aa9.52□□□□□ -0.89
VPS60YDR486C PET191Q02772 108 aa9.52□□□□□ -0.89
VPS60YDR486C KAP120Q02932 1032 aa9.52□□□□□ -0.89
VPS60YDR486C MRX8Q05473 314 aa9.52□□□□□ -0.89
VPS60YDR486C SYC1Q08553 188 aaPredicted RBP9.52□□□□□ -0.89
VPS60YDR486C CDC31P06704 161 aaKnown RBP9.51□□□□□ -0.89
VPS60YDR486C COX9P07255 59 aa9.51□□□□□ -0.89
VPS60YDR486C SOF1P33750 489 aaKnown RBP9.51□□□□□ -0.89
VPS60YDR486C ZRT3P34240 503 aa9.51□□□□□ -0.89
VPS60YDR486C MGE1P38523 228 aa9.51□□□□□ -0.89
VPS60YDR486C PTH1P38876 190 aaKnown RBP9.51□□□□□ -0.89
VPS60YDR486C CCC1P47818 322 aa9.51□□□□□ -0.89
VPS60YDR486C PMT5P52867 743 aa9.51□□□□□ -0.89
VPS60YDR486C RAI1P53063 387 aaKnown RBP9.51□□□□□ -0.89
VPS60YDR486C SOK2P53438 785 aaPredicted RBP9.51□□□□□ -0.89
VPS60YDR486C SSY1Q03770 852 aa9.51□□□□□ -0.89
VPS60YDR486C MSS11Q03825 758 aa9.51□□□□□ -0.89
VPS60YDR486C HRI1Q05905 244 aaKnown RBP9.51□□□□□ -0.89
VPS60YDR486C GPN3Q06543 272 aa9.51□□□□□ -0.89
VPS60YDR486C MCH4Q08268 501 aa9.51□□□□□ -0.89
VPS60YDR486C PEX27Q08580 376 aa9.51□□□□□ -0.89
VPS60YDR486C MSW1P04803 379 aa9.5□□□□□ -0.89
VPS60YDR486C SPO7P18410 259 aa9.5□□□□□ -0.89
VPS60YDR486C MEK1P24719 497 aaPredicted RBP9.5□□□□□ -0.89
VPS60YDR486C KRR1P25586 316 aaPredicted RBP9.5□□□□□ -0.89
VPS60YDR486C MTH1P35198 433 aa9.5□□□□□ -0.89
VPS60YDR486C ADO1P47143 340 aaKnown RBP9.5□□□□□ -0.89
VPS60YDR486C CWC23P52868 283 aaPredicted RBP9.5□□□□□ -0.89
VPS60YDR486C AIM36Q03798 255 aa9.5□□□□□ -0.89
VPS60YDR486C NNT1Q05874 261 aa9.5□□□□□ -0.89
VPS60YDR486C GAS2Q06135 555 aa9.5□□□□□ -0.89
VPS60YDR486C YLR352WQ06479 807 aa9.5□□□□□ -0.89
VPS60YDR486C TIR4Q12218 487 aaPredicted RBP9.5□□□□□ -0.89
VPS60YDR486C PTC6P25646 442 aa9.49□□□□□ -0.89
VPS60YDR486C SHE2P36068 246 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
VPS60YDR486C ANR2P36090 516 aaPredicted RBP9.49□□□□□ -0.89
VPS60YDR486C YBR137WP38276 179 aa9.49□□□□□ -0.89
VPS60YDR486C YHK8P38776 514 aa9.49□□□□□ -0.89
VPS60YDR486C ATG18P43601 500 aa9.49□□□□□ -0.89
VPS60YDR486C RMD9P53140 646 aaKnown RBP9.49□□□□□ -0.89
VPS60YDR486C RPN14P53196 417 aa9.49□□□□□ -0.89
VPS60YDR486C YNR040WP53736 256 aa9.49□□□□□ -0.89
VPS60YDR486C CIK1Q01649 594 aa9.49□□□□□ -0.89
VPS60YDR486C COQ11Q05892 277 aa9.49□□□□□ -0.89
VPS60YDR486C NMA1Q06178 401 aaKnown RBP9.49□□□□□ -0.89
VPS60YDR486C TSR2Q06672 205 aaKnown RBP9.49□□□□□ -0.89
VPS60YDR486C YDL218WQ07629 317 aa9.49□□□□□ -0.89
VPS60YDR486C SUS1Q6WNK7 96 aa9.49□□□□□ -0.89
VPS60YDR486C QCR7P00128 127 aa9.48□□□□□ -0.89
VPS60YDR486C DBF2P22204 572 aa9.48□□□□□ -0.89
VPS60YDR486C ERG4P25340 473 aa9.48□□□□□ -0.89
VPS60YDR486C PAU2P32612 120 aa9.48□□□□□ -0.89
VPS60YDR486C SPT10P35208 640 aa9.48□□□□□ -0.89
VPS60YDR486C CCZ1P38273 704 aa9.48□□□□□ -0.89
VPS60YDR486C FCY21P40039 528 aa9.48□□□□□ -0.89
VPS60YDR486C SLS1P42900 643 aa9.48□□□□□ -0.89
VPS60YDR486C DPB11P47027 764 aaPredicted RBP9.48□□□□□ -0.89
VPS60YDR486C YJR120WP47157 116 aa9.48□□□□□ -0.89
VPS60YDR486C HSV2P50079 448 aaPredicted RBP9.48□□□□□ -0.89
VPS60YDR486C PCP1P53259 346 aa9.48□□□□□ -0.89
VPS60YDR486C SRP1Q02821 542 aaKnown RBP9.48□□□□□ -0.89
VPS60YDR486C TDA1Q03533 586 aa9.48□□□□□ -0.89
VPS60YDR486C SSK1Q07084 712 aa9.48□□□□□ -0.89
VPS60YDR486C YBL113CQ7M4S9 792 aa9.48□□□□□ -0.89
VPS60YDR486C BLM10P43583 2143 aa9.47□□□□□ -0.89
VPS60YDR486C SOD2P00447 233 aa9.47□□□□□ -0.89
VPS60YDR486C ADK1P07170 222 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C ZUO1P32527 433 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C TMA19P35691 167 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C SDS24P38314 527 aa9.47□□□□□ -0.89
VPS60YDR486C SLZ1P40167 298 aa9.47□□□□□ -0.89
VPS60YDR486C LYS20P48570 428 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C DOC1P53068 250 aa9.47□□□□□ -0.89
VPS60YDR486C YGL204CP53089 101 aa9.47□□□□□ -0.89
VPS60YDR486C MRH4P53166 561 aa9.47□□□□□ -0.89
VPS60YDR486C MRP51Q02950 344 aa9.47□□□□□ -0.89
VPS60YDR486C YMR265CQ03508 461 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C PLB2Q03674 706 aa9.47□□□□□ -0.89
VPS60YDR486C RVB1Q03940 463 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C MRPL35Q06678 367 aa9.47□□□□□ -0.89
VPS60YDR486C LYS21Q12122 440 aaKnown RBP9.47□□□□□ -0.89
VPS60YDR486C GCN4P03069 281 aa9.46□□□□□ -0.9
VPS60YDR486C HIS3P06633 220 aa9.46□□□□□ -0.9
VPS60YDR486C RPS18AP0CX55 146 aaKnown RBP9.46□□□□□ -0.9
VPS60YDR486C RPS18BP0CX56 146 aaPredicted RBP9.46□□□□□ -0.9
VPS60YDR486C NPL6P32832 435 aa9.46□□□□□ -0.9
VPS60YDR486C MRPL39P36533 70 aa9.46□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms