RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YGR066C	P53242	292 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	SOK2	P53438	785 aa	Predicted RBP	6.45	□□□□□ -1.38
SKP1	YDR328C	BSC5	P53755	489 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	SUR7	P54003	302 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	RSM28	Q03430	361 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	AIM36	Q03798	255 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	MSS11	Q03825	758 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	MCH4	Q08268	501 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	SFG1	Q12507	346 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	YLR099W-A	Q3E798	87 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	Q0144	Q9ZZW2	109 aa		6.45	□□□□□ -1.38
SKP1	YDR328C	GCN1	P33892	2672 aa	Known RBP	6.45	□□□□□ -1.38
SKP1	YDR328C	YBR056W-A	I2HB52	66 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	CDC9	P04819	755 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	CDC31	P06704	161 aa	Known RBP	6.44	□□□□□ -1.38
SKP1	YDR328C	CBP6	P07253	162 aa	Predicted RBP	6.44	□□□□□ -1.38
SKP1	YDR328C	ZUO1	P32527	433 aa	Known RBP	6.44	□□□□□ -1.38
SKP1	YDR328C	PEX32	P38292	413 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	MGE1	P38523	228 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	YHK8	P38776	514 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	FCY21	P40039	528 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	RAI1	P53063	387 aa	Known RBP	6.44	□□□□□ -1.38
SKP1	YDR328C	YGL204C	P53089	101 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	PCP1	P53259	346 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	MRX8	Q05473	314 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	RBS1	Q05672	457 aa	Known RBP	6.44	□□□□□ -1.38
SKP1	YDR328C	HRI1	Q05905	244 aa	Known RBP	6.44	□□□□□ -1.38
SKP1	YDR328C	CTS2	Q06350	511 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	GPN3	Q06543	272 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	MRPL35	Q06678	367 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	YOR378W	Q08902	515 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	TY1A-BL	Q12266	440 aa		6.44	□□□□□ -1.38
SKP1	YDR328C	PBS2	P08018	668 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	STE18	P18852	110 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	ERG9	P29704	444 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	SOF1	P33750	489 aa	Known RBP	6.43	□□□□□ -1.38
SKP1	YDR328C	MTH1	P35198	433 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	ANR2	P36090	516 aa	Predicted RBP	6.43	□□□□□ -1.38
SKP1	YDR328C	MBA1	P38300	278 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	LYS5	P50113	272 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	CWC23	P52868	283 aa	Predicted RBP	6.43	□□□□□ -1.38
SKP1	YDR328C	RMD9	P53140	646 aa	Known RBP	6.43	□□□□□ -1.38
SKP1	YDR328C	PET191	Q02772	108 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	TDA1	Q03533	586 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	GAS2	Q06135	555 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	TSR2	Q06672	205 aa	Known RBP	6.43	□□□□□ -1.38
SKP1	YDR328C	BRE4	Q07660	1125 aa		6.43	□□□□□ -1.38
SKP1	YDR328C	SYC1	Q08553	188 aa	Predicted RBP	6.43	□□□□□ -1.38
SKP1	YDR328C	MSW1	P04803	379 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	SPO7	P18410	259 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	PAU2	P32612	120 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	RPC34	P32910	317 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	6.42	□□□□□ -1.38	not detected
SKP1	YDR328C	SDS24	P38314	527 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	SLS1	P42900	643 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	YGL260W	P53056	76 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	MRH4	P53166	561 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	RPN14	P53196	417 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	ASI3	P53983	676 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	CIK1	Q01649	594 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	KAP120	Q02932	1032 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	SSY1	Q03770	852 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	YDR102C	Q03864	110 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	NNT1	Q05874	261 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	LUC7	Q07508	261 aa	Predicted RBP	6.42	□□□□□ -1.38
SKP1	YDR328C	PEX27	Q08580	376 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	RCN2	Q12044	265 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	SUS1	Q6WNK7	96 aa		6.42	□□□□□ -1.38
SKP1	YDR328C	SCEI	P03882	235 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	HIS3	P06633	220 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	DBF2	P22204	572 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	MEK1	P24719	497 aa	Predicted RBP	6.41	□□□□□ -1.38
SKP1	YDR328C	TMA19	P35691	167 aa	Known RBP	6.41	□□□□□ -1.38
SKP1	YDR328C	SFK1	P35735	353 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	YBR137W	P38276	179 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	STS1	P38637	319 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	SER2	P42941	309 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	ATG18	P43601	500 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	IMD3	P50095	523 aa	Known RBP	6.41	□□□□□ -1.38
SKP1	YDR328C	DOC1	P53068	250 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	YNR040W	P53736	256 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	MRPL19	P53875	158 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	RVB1	Q03940	463 aa	Known RBP	6.41	□□□□□ -1.38
SKP1	YDR328C	COQ11	Q05892	277 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	NMA1	Q06178	401 aa	Known RBP	6.41	□□□□□ -1.38
SKP1	YDR328C	TIR4	Q12218	487 aa	Predicted RBP	6.41	□□□□□ -1.38
SKP1	YDR328C	RTN2	Q12443	393 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	YBL113C	Q7M4S9	792 aa		6.41	□□□□□ -1.38
SKP1	YDR328C	SOD2	P00447	233 aa		6.4	□□□□□ -1.38
SKP1	YDR328C	GCN4	P03069	281 aa		6.4	□□□□□ -1.38
SKP1	YDR328C	PHO4	P07270	312 aa	Known RBP	6.4	□□□□□ -1.38
SKP1	YDR328C	RPS18A	P0CX55	146 aa	Known RBP	6.4	□□□□□ -1.38
SKP1	YDR328C	RPS18B	P0CX56	146 aa	Predicted RBP	6.4	□□□□□ -1.38
SKP1	YDR328C	ERG4	P25340	473 aa		6.4	□□□□□ -1.38
SKP1	YDR328C	KRR1	P25586	316 aa	Predicted RBP	6.4	□□□□□ -1.38
SKP1	YDR328C	SPT14	P32363	452 aa		6.4	□□□□□ -1.38
SKP1	YDR328C	ERG24	P32462	438 aa	Known RBP	6.4	□□□□□ -1.38
SKP1	YDR328C	RTT105	P40063	208 aa		6.4	□□□□□ -1.38
SKP1	YDR328C	SLZ1	P40167	298 aa		6.4	□□□□□ -1.38
SKP1	YDR328C	BNA6	P43619	295 aa		6.4	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms