RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	BUR2	Q05949	395 aa		0.72	□□□□□ -2.29
CSN9	YDR179C	YOR268C	Q08734	132 aa		0.72	□□□□□ -2.29
CSN9	YDR179C	YDR262W	Q12331	272 aa		0.72	□□□□□ -2.29
CSN9	YDR179C	ZRT1	P32804	376 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	PHO89	P38361	574 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	YHI9	P38765	294 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	TIF34	P40217	347 aa	Known RBP	0.71	□□□□□ -2.3
CSN9	YDR179C	YJL118W	P47022	219 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	TPN1	P53099	579 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	SWC4	P53201	476 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	SPO24	Q3E752	67 aa		0.71	□□□□□ -2.3
CSN9	YDR179C	PAN1	P32521	1480 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	RAD7	P06779	565 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	RAD10	P06838	210 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	PUT1	P09368	476 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	YCR102C	P25608	368 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	ATG15	P25641	520 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	VPH1	P32563	840 aa	Known RBP	0.7	□□□□□ -2.3
CSN9	YDR179C	SFC1	P33303	322 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	DRE2	P36152	348 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	VAB2	P40003	282 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	YNL143C	P53908	130 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	DAD3	P69850	94 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	MRS2	Q01926	470 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	CAB5	Q03941	241 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	YPL247C	Q12523	523 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	IZH4	Q99393	312 aa		0.7	□□□□□ -2.3
CSN9	YDR179C	STE3	P06783	470 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	YCR025C	P25352	136 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	ERG2	P32352	222 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	SCM4	P32564	187 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	IMP3	P32899	183 aa	Predicted RBP	0.69	□□□□□ -2.3
CSN9	YDR179C	PEP8	P40335	379 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	JEM1	P40358	645 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	INA22	P40576	216 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	YGR168C	P53293	376 aa		0.69	□□□□□ -2.3
CSN9	YDR179C	RRP42	Q12277	265 aa	Predicted RBP	0.69	□□□□□ -2.3
CSN9	YDR179C	RAD3	P06839	778 aa		0.68	□□□□□ -2.3
CSN9	YDR179C	YOL162W	P0CF19	215 aa		0.68	□□□□□ -2.3
CSN9	YDR179C	TOM40	P23644	387 aa	Known RBP	0.68	□□□□□ -2.3
CSN9	YDR179C	KRE6	P32486	720 aa		0.68	□□□□□ -2.3
CSN9	YDR179C	AEP1	P32493	518 aa		0.68	□□□□□ -2.3
CSN9	YDR179C	YER135C	P40082	130 aa		0.68	□□□□□ -2.3
CSN9	YDR179C	UBC13	P52490	153 aa		0.68	□□□□□ -2.3
CSN9	YDR179C	MZM1	Q03429	123 aa	Predicted RBP	0.68	□□□□□ -2.3
CSN9	YDR179C	SGA1	P08019	549 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	DOA4	P32571	926 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	YBR062C	P38239	180 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	SEN34	P39707	275 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	MPP10	P47083	593 aa	Known RBP	0.67	□□□□□ -2.3
CSN9	YDR179C	OKP1	P53298	406 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	CAB4	P53332	305 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	YMR114C	Q04471	368 aa	Known RBP	0.67	□□□□□ -2.3
CSN9	YDR179C	STE23	Q06010	1027 aa		0.67	□□□□□ -2.3
CSN9	YDR179C	SMT3	Q12306	101 aa	Known RBP	0.67	□□□□□ -2.3
CSN9	YDR179C	CDC7	P06243	507 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	RNR2	P09938	399 aa	Known RBP	0.66	□□□□□ -2.3
CSN9	YDR179C	TAL1	P15019	335 aa	Known RBP	0.66	□□□□□ -2.3
CSN9	YDR179C	COT1	P32798	439 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	POP8	P38208	133 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	SHQ1	P40486	507 aa	Predicted RBP	0.66	□□□□□ -2.3
CSN9	YDR179C	GON7	P46984	123 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	RSC1	P53236	928 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	PRM15	Q03262	622 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	ECM18	Q04623	453 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	YPR1	Q12458	312 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	YPR064W	Q12492	139 aa		0.66	□□□□□ -2.3
CSN9	YDR179C	NOT5	Q12514	560 aa	Predicted RBP	0.66	□□□□□ -2.3
CSN9	YDR179C	ADH5	P38113	351 aa	Known RBP	0.65	□□□□□ -2.31
CSN9	YDR179C	DSE2	P38844	325 aa		0.65	□□□□□ -2.31
CSN9	YDR179C	YDR089W	P38966	869 aa		0.65	□□□□□ -2.31
CSN9	YDR179C	YHB1	P39676	399 aa	Known RBP	0.65	□□□□□ -2.31
CSN9	YDR179C	AVT7	P40501	490 aa		0.65	□□□□□ -2.31
CSN9	YDR179C	YPT32	P51996	222 aa	Known RBP	0.65	□□□□□ -2.31
CSN9	YDR179C	YML018C	Q03730	393 aa		0.65	□□□□□ -2.31
CSN9	YDR179C	PEX12	Q04370	399 aa		0.65	□□□□□ -2.31
CSN9	YDR179C	DBP9	Q06218	594 aa	Known RBP	0.65	□□□□□ -2.31
CSN9	YDR179C	YOL019W	Q08157	551 aa		0.65	□□□□□ -2.31
CSN9	YDR179C	RPL31A	P0C2H8	113 aa	Known RBP	0.64	□□□□□ -2.31
CSN9	YDR179C	CCA1	P21269	546 aa		0.64	□□□□□ -2.31
CSN9	YDR179C	DPB2	P24482	689 aa	Predicted RBP	0.64	□□□□□ -2.31
CSN9	YDR179C	CSG2	P35206	410 aa		0.64	□□□□□ -2.31
CSN9	YDR179C	YPC1	P38298	316 aa		0.64	□□□□□ -2.31
CSN9	YDR179C	TAD2	P47058	250 aa		0.64	□□□□□ -2.31
CSN9	YDR179C	ASI3	P53983	676 aa		0.64	□□□□□ -2.31
CSN9	YDR179C	SAM4	Q08985	325 aa	Known RBP	0.64	□□□□□ -2.31
CSN9	YDR179C	YBL112C	Q3E7Y4	105 aa		0.64	□□□□□ -2.31
CSN9	YDR179C	RPL18A	P0CX49	186 aa	Known RBP	0.63	□□□□□ -2.31
CSN9	YDR179C	RPL18B	P0CX50	186 aa	Known RBP	0.63	□□□□□ -2.31
CSN9	YDR179C	SUA5	P32579	426 aa		0.63	□□□□□ -2.31
CSN9	YDR179C	RXT2	P38255	430 aa		0.63	□□□□□ -2.31
CSN9	YDR179C	TEM1	P38987	245 aa		0.63	□□□□□ -2.31
CSN9	YDR179C	SNX4	P47057	423 aa		0.63	□□□□□ -2.31
CSN9	YDR179C	CUE3	P53137	624 aa	Known RBP	0.63	□□□□□ -2.31
CSN9	YDR179C	YPL039W	Q03080	316 aa		0.63	□□□□□ -2.31
CSN9	YDR179C	FRE6	Q12473	712 aa		0.63	□□□□□ -2.31
CSN9	YDR179C	RNP1	P32385	249 aa		0.62	□□□□□ -2.31
CSN9	YDR179C	YKR045C	P36138	183 aa		0.62	□□□□□ -2.31
CSN9	YDR179C	GDS1	P41913	522 aa		0.62	□□□□□ -2.31
CSN9	YDR179C	YMR209C	Q03648	457 aa		0.62	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms