RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	RPS25B	P0C0T4	108 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	SST2	P11972	698 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	SAM2	P19358	384 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	MIG1	P27705	504 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	ARP1	P38696	384 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	ISC1	P40015	477 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	SPO73	P40031	143 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	PUG1	P40100	303 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	MOB2	P43563	287 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	SKP1	P52286	194 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	OAZ1	Q02803	292 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	YDR415C	Q04033	374 aa	Predicted RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	YDR444W	Q04093	687 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	ARG7	Q04728	441 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	YMR315W	Q04869	349 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	HRD3	Q05787	833 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	BSC6	Q08280	497 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	NAT5	Q08689	176 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	RRI1	Q12468	440 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	RPS25A	Q3E792	108 aa	Predicted RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	HTS1	P07263	546 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	MSK1	P32048	576 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	SFK1	P35735	353 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	ASC1	P38011	319 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	NTC20	P38302	140 aa	Predicted RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	YER158C	P40095	573 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	RMD8	P43620	662 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	COS10	P52924	374 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	SYF2	P53277	215 aa	Predicted RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	TUB4	P53378	473 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	FRE4	P53746	719 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	YNL134C	P53912	376 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	MET14	Q02196	202 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	RRP45	Q05636	305 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	CTS2	Q06350	511 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	YLR413W	Q06689	675 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	YDR262W	Q12331	272 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	YJR112W-A	Q3E743	109 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	RIM15	P43565	1770 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	YPR170W-B	P0C5R9	85 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	ERS1	P17261	260 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	EXG1	P23776	448 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	ARO2	P28777	376 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	YOX1	P34161	385 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	ASP1	P38986	381 aa	Predicted RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	PRP39	P39682	629 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	AIM25	P47140	327 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	MTL1	P53214	551 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	SAY1	P53324	424 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	YNR029C	P53729	429 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	AAH1	P53909	347 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	APM1	Q00776	475 aa	Predicted RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	NUP100	Q02629	959 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	TMN2	Q04562	672 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	VBA4	Q04602	768 aa	Known RBP	4.82	□□□□□ -1.64
DBF4	YDR052C	YLR036C	Q07986	203 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	COQ10	Q08058	207 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	CRT10	Q08226	957 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
DBF4	YDR052C	TMS1	Q12116	473 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	SKS1	Q12505	502 aa		4.82	□□□□□ -1.64
DBF4	YDR052C	SIR2	P06700	562 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	SCH9	P11792	824 aa	Known RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	ADH7	P25377	361 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	MRP17	P28778	131 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
DBF4	YDR052C	VRP1	P37370	817 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	YBR284W	P38150	797 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	HTD2	P38790	280 aa	Known RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	SKN7	P38889	622 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	MPM1	P40364	252 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	YIL067C	P40514	678 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	GPG1	P53130	126 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	AAT1	Q01802	451 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	YPL077C	Q02831	240 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	THP1	Q08231	455 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	LEA1	Q08963	238 aa	Predicted RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	MMT2	Q08970	484 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	YTM1	Q12024	460 aa	Predicted RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	YLR049C	Q12110	428 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	PST1	Q12355	444 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	FRE6	Q12473	712 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	SAL1	D6W196	494 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	ILV1	P00927	576 aa	Known RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
DBF4	YDR052C	PRE8	P23639	250 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	ZTA1	P38230	334 aa	Known RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	SMK1	P41808	388 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	SET4	P42948	560 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	PAM16	P42949	149 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	PUS2	P53167	370 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	GTR2	P53290	341 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	ACT1	P60010	375 aa	Known RBP	4.81	□□□□□ -1.64
DBF4	YDR052C	SPP2	Q02521	185 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	ATG41	Q12048	136 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	ISA2	Q12425	185 aa		4.81	□□□□□ -1.64
DBF4	YDR052C	GDH1	P07262	454 aa	Known RBP	4.8	□□□□□ -1.64
DBF4	YDR052C	SGF29	P25554	259 aa		4.8	□□□□□ -1.64
DBF4	YDR052C	RIM1	P32445	135 aa	Known RBP	4.8	□□□□□ -1.64
DBF4	YDR052C	GLC7	P32598	312 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms