RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR048C	YDR048C	VMA5	P31412	392 aa	Known RBP	0.54	□□□□□ -2.32
YDR048C	YDR048C	KRE6	P32486	720 aa		0.54	□□□□□ -2.32
YDR048C	YDR048C	DOA4	P32571	926 aa		0.54	□□□□□ -2.32
YDR048C	YDR048C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.54	□□□□□ -2.32	not detected
YDR048C	YDR048C	YHR035W	P38769	630 aa		0.54	□□□□□ -2.32
YDR048C	YDR048C	PRP39	P39682	629 aa	Known RBP	0.54	□□□□□ -2.32
YDR048C	YDR048C	YPT32	P51996	222 aa	Known RBP	0.54	□□□□□ -2.32
YDR048C	YDR048C	DAD3	P69850	94 aa		0.54	□□□□□ -2.32
YDR048C	YDR048C	UTP23	Q12339	254 aa	Known RBP	0.54	□□□□□ -2.32
YDR048C	YDR048C	NUP157	P40064	1391 aa	Known RBP	0.54	□□□□□ -2.32
YDR048C	YDR048C	IMP3	P32899	183 aa	Predicted RBP	0.53	□□□□□ -2.32
YDR048C	YDR048C	SHQ1	P40486	507 aa	Predicted RBP	0.53	□□□□□ -2.32
YDR048C	YDR048C	SEC28	P40509	296 aa	Known RBP	0.53	□□□□□ -2.32
YDR048C	YDR048C	YJL118W	P47022	219 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	YNL143C	P53908	130 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	MRS2	Q01926	470 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	IRC4	Q03036	179 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	YDR262W	Q12331	272 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	SKS1	Q12505	502 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	SPO24	Q3E752	67 aa		0.53	□□□□□ -2.32
YDR048C	YDR048C	VPH1	P32563	840 aa	Known RBP	0.52	□□□□□ -2.33
YDR048C	YDR048C	SCM4	P32564	187 aa		0.52	□□□□□ -2.33
YDR048C	YDR048C	ADH5	P38113	351 aa	Known RBP	0.52	□□□□□ -2.33
YDR048C	YDR048C	PEP8	P40335	379 aa		0.52	□□□□□ -2.33
YDR048C	YDR048C	UBC13	P52490	153 aa		0.52	□□□□□ -2.33
YDR048C	YDR048C	MZM1	Q03429	123 aa	Predicted RBP	0.52	□□□□□ -2.33
YDR048C	YDR048C	YBL112C	Q3E7Y4	105 aa		0.52	□□□□□ -2.33
YDR048C	YDR048C	NBL1	Q3E7Y6	73 aa		0.52	□□□□□ -2.33
YDR048C	YDR048C	YEL009C-A	A0A023PZF2	135 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	STE3	P06783	470 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	SGA1	P08019	549 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	YOL162W	P0CF19	215 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	BMH1	P29311	267 aa	Known RBP	0.51	□□□□□ -2.33
YDR048C	YDR048C	AEP1	P32493	518 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	SFC1	P33303	322 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	DAD2	P36162	133 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	DSE2	P38844	325 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	INA22	P40576	216 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	RPE1	P46969	238 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	GON7	P46984	123 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	NUP57	P48837	541 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	YPL039W	Q03080	316 aa		0.51	□□□□□ -2.33
YDR048C	YDR048C	YMR114C	Q04471	368 aa	Known RBP	0.51	□□□□□ -2.33
YDR048C	YDR048C	POX1	P13711	748 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	ERG2	P32352	222 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	CAT2	P32796	670 aa	Known RBP	0.5	□□□□□ -2.33
YDR048C	YDR048C	DRE2	P36152	348 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	YPC1	P38298	316 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	YHI9	P38765	294 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	SPT8	P38915	602 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	AVT7	P40501	490 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	RPL10	P41805	221 aa	Known RBP	0.5	□□□□□ -2.33
YDR048C	YDR048C	YGL114W	P53134	725 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	OKP1	P53298	406 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	YNL146W	P53906	100 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	NUP49	Q02199	472 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	ECM18	Q04623	453 aa		0.5	□□□□□ -2.33
YDR048C	YDR048C	PUT1	P09368	476 aa		0.49	□□□□□ -2.33
YDR048C	YDR048C	MPP10	P47083	593 aa	Known RBP	0.49	□□□□□ -2.33
YDR048C	YDR048C	CAB5	Q03941	241 aa		0.49	□□□□□ -2.33
YDR048C	YDR048C	PEX12	Q04370	399 aa		0.49	□□□□□ -2.33
YDR048C	YDR048C	YOL019W	Q08157	551 aa		0.49	□□□□□ -2.33
YDR048C	YDR048C	COT1	P32798	439 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	ZRT1	P32804	376 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	GDH2	P33327	1092 aa	Known RBP	0.48	□□□□□ -2.33
YDR048C	YDR048C	POP8	P38208	133 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	PHO89	P38361	574 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	SWC4	P53201	476 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	YGR168C	P53293	376 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	BUR2	Q05949	395 aa		0.48	□□□□□ -2.33
YDR048C	YDR048C	SMT3	Q12306	101 aa	Known RBP	0.48	□□□□□ -2.33
YDR048C	YDR048C	PPH21	P23594	369 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	YKR045C	P36138	183 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	SEN34	P39707	275 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	GLE2	P40066	365 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	GDS1	P41913	522 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	CIS3	P47001	227 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	EOS1	P53938	366 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	YML018C	Q03730	393 aa		0.47	□□□□□ -2.33
YDR048C	YDR048C	RAS2	P01120	322 aa	Known RBP	0.46	□□□□□ -2.34
YDR048C	YDR048C	CCA1	P21269	546 aa		0.46	□□□□□ -2.34
YDR048C	YDR048C	DPB2	P24482	689 aa	Predicted RBP	0.46	□□□□□ -2.34
YDR048C	YDR048C	YGL010W	P25338	174 aa		0.46	□□□□□ -2.34
YDR048C	YDR048C	CSG2	P35206	410 aa		0.46	□□□□□ -2.34
YDR048C	YDR048C	YKL162C	P36052	402 aa		0.46	□□□□□ -2.34
YDR048C	YDR048C	SNX4	P47057	423 aa		0.46	□□□□□ -2.34
YDR048C	YDR048C	DBP9	Q06218	594 aa	Known RBP	0.46	□□□□□ -2.34
YDR048C	YDR048C	IZH4	Q99393	312 aa		0.46	□□□□□ -2.34
YDR048C	YDR048C	RPL31A	P0C2H8	113 aa	Known RBP	0.45	□□□□□ -2.34
YDR048C	YDR048C	RPL18A	P0CX49	186 aa	Known RBP	0.45	□□□□□ -2.34
YDR048C	YDR048C	RPL18B	P0CX50	186 aa	Known RBP	0.45	□□□□□ -2.34
YDR048C	YDR048C	YBR220C	P38318	560 aa		0.45	□□□□□ -2.34
YDR048C	YDR048C	LIN1	P38852	340 aa	Predicted RBP	0.45	□□□□□ -2.34
YDR048C	YDR048C	YHB1	P39676	399 aa	Known RBP	0.45	□□□□□ -2.34
YDR048C	YDR048C	JEM1	P40358	645 aa		0.45	□□□□□ -2.34
YDR048C	YDR048C	AAH1	P53909	347 aa		0.45	□□□□□ -2.34
YDR048C	YDR048C	TAZ1	Q06510	381 aa		0.45	□□□□□ -2.34
YDR048C	YDR048C	RNR2	P09938	399 aa	Known RBP	0.44	□□□□□ -2.34
YDR048C	YDR048C	SCL1	P21243	252 aa	Known RBP	0.44	□□□□□ -2.34
YDR048C	YDR048C	HMT1	P38074	348 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms